RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 SH3BP1Q9Y3L3 701 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 DOCK8Q8NF50 2099 aa11.21□□□□□ -0.61
CCDC90B-218ENST00000533761 IGLV3-10A0A075B6K4 115 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 WASH4PA8MWX3 477 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 KCNN4O15554 427 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ECI2O75521 394 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 PRAMEF12O95522 483 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 TCF3P15923 654 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 CORO1AP31146 461 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ETFBP38117 255 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 VIPR2P41587 438 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 NDST2P52849 883 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 FOXK2Q01167 660 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 GBE1Q04446 702 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ANO4Q32M45 955 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ADGRF1Q5T601 910 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 PIK3R6Q5UE93 754 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 MRPL14Q6P1L8 145 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 FBXO38Q6PIJ6 1188 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 PARM1Q6UWI2 310 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ATPAF2Q8N5M1 289 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 TTC16Q8NEE8 873 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 SH3RF2Q8TEC5 729 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 NSMCE1Q8WV22 266 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 HTR3CQ8WXA8 447 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ELSPBP1Q96BH3 223 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 HDAC11Q96DB2 347 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 RTP4Q96DX8 246 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 OLFM3Q96PB7 478 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 FAM118BQ9BPY3 351 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 USB1Q9BQ65 265 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 KLC2Q9H0B6 622 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 EPC1Q9H2F5 836 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 DPH5Q9H2P9 285 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 GKN1Q9NS71 199 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 THG1LQ9NWX6 298 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 IGSF9Q9P2J2 1179 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 LIMD1Q9UGP4 676 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 VANGL2Q9ULK5 521 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 CCL26Q9Y258 94 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 SPTBN5Q9NRC6 3674 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 E2F8A0AVK6 867 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ESYT3A0FGR9 886 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ARHGAP42A6NI28 874 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 LOC730098B7Z3J9 87 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ANHXE9PGG2 379 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 FAM72CH0Y354 149 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 LEFTY2O00292 366 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ATP8B1O43520 1251 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 MFSD11O43934 449 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 OPHN1O60890 802 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 CLDN11O75508 207 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 NEBLO76041 1014 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 STC2O76061 302 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 SEC31AO94979 1220 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 PSMC3P17980 439 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 CHKAP35790 457 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 TNNT3P45378 269 aaPredicted RBP11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ZXDBP98169 803 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 AP1B1Q10567 949 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 GPS1Q13098 491 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 GPS2Q13227 327 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 SLMAPQ14BN4 828 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 MORF4L2Q15014 288 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 PARP15Q460N3 678 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 C6orf118Q5T5N4 469 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 FAM72AQ5TYM5 149 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 RAP1GAP2Q684P5 730 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 TANGO2Q6ICL3 276 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 FAM72DQ6L9T8 149 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 PPP1R21Q6ZMI0 780 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 HOOK3Q86VS8 718 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 FAM72BQ86X60 149 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 DENND1CQ8IV53 801 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 MFSD6LQ8IWD5 586 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ZNF557Q8N988 423 aaPredicted RBP11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 FAM71DQ8N9W8 422 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 BPIFB1Q8TDL5 484 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 CASKIN2Q8WXE0 1202 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 FGF14Q92915 247 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 FRMD8Q9BZ67 464 aaPredicted RBP11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ANLNQ9NQW6 1124 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 TMPRSS4Q9NRS4 437 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 TMEM248Q9NWD8 314 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 CFAP97Q9P2B7 532 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 TBC1D14Q9P2M4 693 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 ANAPC5Q9UJX4 755 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 NFU1Q9UMS0 254 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 SHOC2Q9UQ13 582 aa11.2□□□□□ -0.62
CCDC90B-218ENST00000533761 NUP210Q8TEM1 1887 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 GOLGA6CA6NDK9 693 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 GOLGA6BA6NDN3 693 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 DRGXA6NNA5 263 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 HEPACAM2A8MVW5 462 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 I6L893 689 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 SLC9A3R1O14745 358 aaPredicted RBP11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 GOLGA6DP0CG33 693 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 TACR2P21452 398 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 FCARP24071 287 aa11.19□□□□□ -0.62
CCDC90B-218ENST00000533761 GARSP41250 739 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms