RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 C1orf54Q8WWF1 131 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 ATG4AQ8WYN0 398 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 FAM3CQ92520 227 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 EZH1Q92800 747 aaPredicted RBP12.18□□□□□ -0.46
COMMD9-208ENST00000533643 TSGA13Q96PP4 275 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 NAP1L3Q99457 506 aaPredicted RBP12.18□□□□□ -0.46
COMMD9-208ENST00000533643 LGMNQ99538 433 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 C2orf49Q9BVC5 232 aaPredicted RBP12.18□□□□□ -0.46
COMMD9-208ENST00000533643 ELOVL2Q9NXB9 296 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 RNF14Q9UBS8 474 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 IPO11Q9UI26 975 aaKnown RBP12.18□□□□□ -0.46
COMMD9-208ENST00000533643 CDC23Q9UJX2 597 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 FBXL21Q9UKT6 434 aa12.18□□□□□ -0.46
COMMD9-208ENST00000533643 BDP1A6H8Y1 2624 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 ANTXRLA6NF34 631 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 K7EQS6 105 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 CBX4O00257 560 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 TIMM44O43615 452 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 PRAMEF11O60813 436 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 MT-CO1P00395 513 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 EGFP01133 1207 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 TNFRSF4P43489 277 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 STARD6P59095 220 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 EIF3EP60228 445 aaKnown RBP12.17□□□□□ -0.46
COMMD9-208ENST00000533643 IL10RBQ08334 325 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 XRCC4Q13426 336 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 EIF4HQ15056 248 aaKnown RBP12.17□□□□□ -0.46
COMMD9-208ENST00000533643 PRKD1Q15139 912 aaPredicted RBP12.17□□□□□ -0.46
COMMD9-208ENST00000533643 ZNF852Q6ZMS4 543 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 LEKR1Q6ZMV7 388 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 ZC3H18Q86VM9 953 aaKnown RBP12.17□□□□□ -0.46
COMMD9-208ENST00000533643 SIX5Q8N196 739 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 PRELID2Q8N945 189 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 CCNYQ8ND76 341 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 SLC35B2Q8TB61 432 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 SORCS1Q8WY21 1168 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 EXOC4Q96A65 974 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 HDAC11Q96DB2 347 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 AP1M1Q9BXS5 423 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 FRMD8P1Q9BZ68 369 aaPredicted RBP12.17□□□□□ -0.46
COMMD9-208ENST00000533643 BRD8Q9H0E9 1235 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 C10orf88Q9H8K7 445 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 HCN2Q9UL51 889 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 HPCAL4Q9UM19 191 aa12.17□□□□□ -0.46
COMMD9-208ENST00000533643 HACD1B0YJ81 288 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 H7C0C1 242 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 KRIT1O00522 736 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 PPP1R12AO14974 1030 aaPredicted RBP12.16□□□□□ -0.46
COMMD9-208ENST00000533643 MCF2LO15068 1137 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 LIASO43766 372 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 CD160O95971 181 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 PEX11BO96011 259 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 ASLP04424 464 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 ATP5BP06576 529 aaKnown RBP12.16□□□□□ -0.46
COMMD9-208ENST00000533643 DLDP09622 509 aaKnown RBP12.16□□□□□ -0.46
COMMD9-208ENST00000533643 RBP3P10745 1247 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 CHRM1P11229 460 aaPredicted RBP12.16□□□□□ -0.46
COMMD9-208ENST00000533643 DRD1P21728 446 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 CCNCP24863 283 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 PAFAH1B1P43034 410 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 ATP5OP48047 213 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 STK19P49842 368 aaPredicted RBP12.16□□□□□ -0.46
COMMD9-208ENST00000533643 ARF5P84085 180 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 ECT2LQ008S8 904 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 SULT2A1Q06520 285 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 PPIDQ08752 370 aaKnown RBP12.16□□□□□ -0.46
COMMD9-208ENST00000533643 GRSF1Q12849 480 aaKnown RBP eCLIP12.16□□□□□ -0.46
COMMD9-208ENST00000533643 SNX1Q13596 522 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 TUBB2AQ13885 445 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 CCNG2Q16589 344 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 PTPRNQ16849 979 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 SLC45A4Q5BKX6 768 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 EMC10Q5UCC4 262 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 LINGO4Q6UY18 593 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 NUDT18Q6ZVK8 323 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 CCDC13Q8IYE1 715 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 CYB5D2Q8WUJ1 264 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 TFB1MQ8WVM0 346 aaKnown RBP12.16□□□□□ -0.46
COMMD9-208ENST00000533643 FATE1Q969F0 183 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 ACDQ96AP0 544 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 SHDQ96IW2 340 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 MRGPRX3Q96LB0 322 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 QKIQ96PU8 341 aaKnown RBP eCLIP12.16□□□□□ -0.46
COMMD9-208ENST00000533643 TUBB2BQ9BVA1 445 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 CIPCQ9C0C6 399 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 SP110Q9HB58 689 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 PDFQ9HBH1 243 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 DNPEPQ9ULA0 475 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 NDRG2Q9UN36 371 aaKnown RBP12.16□□□□□ -0.46
COMMD9-208ENST00000533643 ERVW-1Q9UQF0 538 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 STARD13Q9Y3M8 1113 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 ACTL7AQ9Y615 435 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 KIAA1549LQ6ZVL6 1849 aa12.16□□□□□ -0.46
COMMD9-208ENST00000533643 F5P12259 2224 aa12.15□□□□□ -0.46
COMMD9-208ENST00000533643 A0A0C4DFX4 3053 aa12.15□□□□□ -0.46
COMMD9-208ENST00000533643 NUP205Q92621 2012 aa12.15□□□□□ -0.46
COMMD9-208ENST00000533643 CXorf51AA0A1B0GTR3 108 aa12.15□□□□□ -0.46
COMMD9-208ENST00000533643 ZSCAN5CA6NGD5 496 aaPredicted RBP12.15□□□□□ -0.46
COMMD9-208ENST00000533643 K7ERQ8 282 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms