RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 DHRS13Q6UX07 377 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 USP30Q70CQ3 517 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 IRF2BP2Q7Z5L9 587 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 TMPRSS12Q86WS5 348 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 XYLT1Q86Y38 959 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 ZDHHC17Q8IUH5 632 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 UNC45BQ8IWX7 931 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 WFDC5Q8TCV5 224 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 ACE2Q9BYF1 805 aaPredicted RBP8.98□□□□□ -0.97
COPB1-210ENST00000533533 EDEM3Q9BZQ6 932 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 RBSNQ9H1K0 784 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 RSPH9Q9H1X1 276 aaPredicted RBP8.98□□□□□ -0.97
COPB1-210ENST00000533533 HAUS4Q9H6D7 363 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 METTL5Q9NRN9 209 aaKnown RBP8.98□□□□□ -0.97
COPB1-210ENST00000533533 ASNSD1Q9NWL6 643 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.98□□□□□ -0.971e-13■■□□□ 14.1
COPB1-210ENST00000533533 ADAM22Q9P0K1 906 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 FTSJ1Q9UET6 329 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 SLC12A6Q9UHW9 1150 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 NCKAP1Q9Y2A7 1128 aa8.98□□□□□ -0.97
COPB1-210ENST00000533533 LUC7L2Q9Y383 392 aaKnown RBP8.98□□□□□ -0.97
COPB1-210ENST00000533533 NYNRINQ9P2P1 1898 aaKnown RBP8.98□□□□□ -0.97
COPB1-210ENST00000533533 A0A1B0GTQ1 180 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 GOLGA6L7A0A1B0GV03 622 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 A0A1W2PPC4 97 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 FAM47DPA6NHR8 397 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 M0QYT0 321 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 IRAK2O43187 625 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 ACSL4O60488 711 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 TBL1XO60907 577 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 DAB1O75553 588 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 GJB6O95452 261 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 CALB1P05937 261 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 MMP8P22894 467 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 CASP14P31944 242 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 NOS2P35228 1153 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 PBX1P40424 430 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 GABRB2P47870 512 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 GALCP54803 685 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 PITX1P78337 314 aaPredicted RBP8.97□□□□□ -0.97
COPB1-210ENST00000533533 ZBED6P86452 979 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 TSR1Q2NL82 804 aaKnown RBP8.97□□□□□ -0.97
COPB1-210ENST00000533533 ZC3H12AQ5D1E8 599 aaKnown RBP8.97□□□□□ -0.97
COPB1-210ENST00000533533 FIGNQ5HY92 759 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 PIK3R6Q5UE93 754 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 E4F1Q66K89 784 aaPredicted RBP8.97□□□□□ -0.97
COPB1-210ENST00000533533 KIAA0895LQ68EN5 471 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 SPECC1LQ69YQ0 1117 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 RFWD3Q6PCD5 774 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 SND1Q7KZF4 910 aaKnown RBP eCLIP8.97□□□□□ -0.975e-6■■■■□ 22.5
COPB1-210ENST00000533533 SLC26A9Q7LBE3 791 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 VPS36Q86VN1 386 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 EMC1Q8N766 993 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 ATP6V0D2Q8N8Y2 350 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 ZNF557Q8N988 423 aaPredicted RBP8.97□□□□□ -0.97
COPB1-210ENST00000533533 GANCQ8TET4 914 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 TTC17Q96AE7 1141 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 IQCDQ96DY2 449 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 MYO19Q96H55 970 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 CRELD1Q96HD1 420 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 LMLNQ96KR4 655 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 SLC2A13Q96QE2 648 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 ELF4Q99607 663 aaPredicted RBP8.97□□□□□ -0.97
COPB1-210ENST00000533533 SELENOOQ9BVL4 669 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 IRX2Q9BZI1 471 aaPredicted RBP8.97□□□□□ -0.97
COPB1-210ENST00000533533 TTYH3Q9C0H2 523 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 NUCKS1Q9H1E3 243 aaKnown RBP8.97□□□□□ -0.97
COPB1-210ENST00000533533 PABPC3Q9H361 631 aaKnown RBP8.97□□□□□ -0.97
COPB1-210ENST00000533533 MTG2Q9H4K7 406 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 FBXL12Q9NXK8 326 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.97□□□□□ -0.97
COPB1-210ENST00000533533 AIPL1Q9NZN9 384 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 STIM2Q9P246 746 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 STAP1Q9ULZ2 295 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 CAPN11Q9UMQ6 739 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 SCML1Q9UN30 329 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 TLR6Q9Y2C9 796 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 PCDHGA1Q9Y5H4 931 aa8.97□□□□□ -0.97
COPB1-210ENST00000533533 A0A1W2PQJ5 194 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 TYW5A2RUC4 315 aaKnown RBP8.96□□□□□ -0.98
COPB1-210ENST00000533533 ANKRD62A6NC57 917 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 PLK4O00444 970 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 RNASEH1O60930 286 aaKnown RBP8.96□□□□□ -0.98
COPB1-210ENST00000533533 SIN3BO75182 1162 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 IGLV3-27P01718 113 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 WNT1P04628 370 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 GYPCP04921 128 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 C1SP09871 688 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 CDK4P11802 303 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 UNGP13051 313 aaPredicted RBP8.96□□□□□ -0.98
COPB1-210ENST00000533533 JUPP14923 745 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 ABCB4P21439 1286 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 SLC6A4P31645 630 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 CCR1P32246 355 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 HNF1BP35680 557 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 ABCG1P45844 678 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 ST8SIA6P61647 398 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 ATP11AP98196 1134 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 CENPCQ03188 943 aa8.96□□□□□ -0.98
COPB1-210ENST00000533533 DEUP1Q05D60 604 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms