RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 ACAD10Q6JQN1 1059 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 TMEM53Q6P2H8 277 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 RHBDF2Q6PJF5 856 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 RBBP8NLQ8NC74 664 aaPredicted RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 PPFIBP2Q8ND30 876 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 FAM13CQ8NE31 585 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 LMO3Q8TAP4 145 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CHFRQ96EP1 664 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 NR1H4Q96RI1 486 aaPredicted RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 RBM15Q96T37 977 aaKnown RBP eCLIP5.54□□□□□ -1.524e-6■□□□□ 9.8
CKAP5-212ENST00000533413 GAS2L1Q99501 681 aaPredicted RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 TUBB6Q9BUF5 446 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 TBC1D10AQ9BXI6 508 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 HEMGNQ9BXL5 484 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 DCLK3Q9C098 648 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 TRABDQ9H4I3 376 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 SAYSD1Q9NPB0 183 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 INTS10Q9NVR2 710 aaKnown RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 SENP1Q9P0U3 644 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 MOSPD1Q9UJG1 213 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 ZFP69BQ9UJL9 534 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 PCDHB12Q9Y5F1 795 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 MAGEA13PA6NCF6 341 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 ATXN7O15265 892 aaPredicted RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 AP1G1O43747 822 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 UPP2O95045 317 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 TJP3O95049 919 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 SPATA31D3P0C874 917 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 PABPC4LP0CB38 370 aaKnown RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 HPGDP15428 266 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CHRNB2P17787 502 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 SLC1A1P43005 524 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 RABIFP47224 123 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 HSD17B4P51659 736 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 POLE2P56282 527 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 B2MP61769 119 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 NKX3-2P78367 333 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CDR2Q01850 454 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 LIPEQ05469 1076 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 MGAT5Q09328 741 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 ZNF568Q3ZCX4 644 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 C1orf185Q5T7R7 199 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 YOD1Q5VVQ6 348 aaPredicted RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CGB2Q6NT52 195 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 PPP1R2P3Q6NXS1 205 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 C6orf15Q6UXA7 325 aaPredicted RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 ZYG11AQ6WRX3 759 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 SPATA31D4Q6ZUB0 917 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 SLC47A2Q86VL8 602 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CPNE8Q86YQ8 564 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 FAM71AQ8IYT1 594 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 WDR60Q8WVS4 1066 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CLEC4DQ8WXI8 215 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 KAT5Q92993 513 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 UTP4Q969X6 686 aaKnown RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 PLD4Q96BZ4 506 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 RIPOR3Q96MK2 946 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 PWWP2AQ96N64 755 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 WDR11Q9BZH6 1224 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 ABHD16BQ9H3Z7 469 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 DCLRE1BQ9H816 532 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 AGO4Q9HCK5 861 aaKnown RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 FAIMQ9NVQ4 179 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 NDUFA13Q9P0J0 144 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CPSF3Q9UKF6 684 aaKnown RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CHKBQ9Y259 395 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 Q9Y3F1 56 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 HNRNPCL2B2RXH8 293 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 NVLO15381 856 aaKnown RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 SEPT4O43236 478 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 FBXO21O94952 628 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CFBP00751 764 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CYP3A4P08684 503 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 POLR2MP0CAP2 368 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 PLS3P13797 630 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CYP11B1P15538 503 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 FUT4P22083 530 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 PTPN4P29074 926 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 EPHB2P29323 1055 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 GJC1P36383 396 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 PTDSS1P48651 473 aaKnown RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 BLVRAP53004 296 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 PPP5CP53041 499 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 WDR4P57081 412 aaKnown RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 FMO1Q01740 532 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 PCSK7Q16549 785 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 ARL13BQ3SXY8 428 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 EPC2Q52LR7 807 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 FAM47CQ5HY64 1035 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 SPDYAQ5MJ70 313 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 LIN9Q5TKA1 542 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 KLC3Q6P597 504 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 KCTD6Q8NC69 237 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 DDI1Q8WTU0 396 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 PSPC1Q8WXF1 523 aaKnown RBP5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CRYGNQ8WXF5 182 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 STMN2Q93045 179 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 MCUR1Q96AQ8 359 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 CCDC127Q96BQ5 260 aa5.54□□□□□ -1.52
CKAP5-212ENST00000533413 HS6ST2Q96MM7 605 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms