RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 FAM169AQ9Y6X4 670 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 CACNA1EQ15878 2313 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 GOLGA6L10A0A0M3HER8 536 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 GFRA2O00451 464 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 CACNG3O60359 315 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 C4BPAP04003 597 aaKnown RBP8.51□□□□□ -1.05
NEDD8-207ENST00000533242 ACO1P21399 889 aaKnown RBP8.51□□□□□ -1.05
NEDD8-207ENST00000533242 IFRD2Q12894 506 aaPredicted RBP8.51□□□□□ -1.05
NEDD8-207ENST00000533242 QPCTQ16769 361 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 KRT71Q3SY84 523 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 ZACNQ401N2 412 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 TMPRSS7Q7RTY8 843 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 METTL3Q86U44 580 aaKnown RBP8.51□□□□□ -1.05
NEDD8-207ENST00000533242 SLCO6A1Q86UG4 719 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 UBL4BQ8N7F7 174 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 PNPLA1Q8N8W4 532 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 DNASE2BQ8WZ79 361 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 CYFIP2Q96F07 1278 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 XPO6Q96QU8 1125 aaKnown RBP8.51□□□□□ -1.05
NEDD8-207ENST00000533242 ACOX2Q99424 681 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 FAM118BQ9BPY3 351 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 RAB17Q9H0T7 212 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 EPN3Q9H201 632 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 PPANQ9NQ55 473 aaKnown RBP8.51□□□□□ -1.05
NEDD8-207ENST00000533242 TMEM30AQ9NV96 361 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 DNAJC17Q9NVM6 304 aaKnown RBP8.51□□□□□ -1.05
NEDD8-207ENST00000533242 TMEM51Q9NW97 253 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 IL37Q9NZH6 218 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 MARK1Q9P0L2 795 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 WDR35Q9P2L0 1181 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 ANAPC7Q9UJX3 599 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 PCOLCE2Q9UKZ9 415 aa8.51□□□□□ -1.05
NEDD8-207ENST00000533242 FAM187AA6NFU0 413 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 SMIM23A6NLE4 172 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 EIF4E1BA6NMX2 242 aaKnown RBP8.5□□□□□ -1.05
NEDD8-207ENST00000533242 HLA-DRAP01903 254 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 ZDHHC11BP0C7U3 371 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 CD6P30203 668 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 CHRNA3P32297 505 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 COILP38432 576 aaPredicted RBP8.5□□□□□ -1.05
NEDD8-207ENST00000533242 CLDN10P78369 228 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 GCNT1Q02742 428 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 SNX1Q13596 522 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 DHX34Q14147 1143 aaKnown RBP8.5□□□□□ -1.05
NEDD8-207ENST00000533242 SLC29A2Q14542 456 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 CYP1B1Q16678 543 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 HTR3DQ70Z44 454 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 CHPFQ8IZ52 775 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 MCOLN2Q8IZK6 566 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 ZNF473Q8WTR7 871 aaKnown RBP8.5□□□□□ -1.05
NEDD8-207ENST00000533242 MRGPRX1Q96LB2 322 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 CCT8L2Q96SF2 557 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 RASSF4Q9H2L5 321 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 KIAA1586Q9HCI6 787 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 R3HDM2Q9Y2K5 976 aaKnown RBP8.5□□□□□ -1.05
NEDD8-207ENST00000533242 RAXQ9Y2V3 346 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 PCDHGB2Q9Y5G2 931 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 GON4LQ3T8J9 2241 aa8.5□□□□□ -1.05
NEDD8-207ENST00000533242 FASNP49327 2511 aaKnown RBP8.5□□□□□ -1.05
NEDD8-207ENST00000533242 TMEM131Q92545 1883 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 MEI4A8MW99 385 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 CLDN5O00501 218 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 EBAG9O00559 213 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 TRIM24O15164 1050 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 DKK1O94907 266 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 CER1O95813 267 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 TNNI1P19237 187 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 PMS2P54278 862 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 IFI35P80217 286 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-207ENST00000533242 SPRED3Q2MJR0 410 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 SEL1L2Q5TEA6 688 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 IL27RAQ6UWB1 636 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 KIAA1324Q6UXG2 1013 aaKnown RBP8.49□□□□□ -1.05
NEDD8-207ENST00000533242 PRUNE1Q86TP1 453 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 PACS2Q86VP3 889 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 NLRP14Q86W24 1093 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 B3GALNT2Q8NCR0 500 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 BAHD1Q8TBE0 780 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-207ENST00000533242 WBP2Q969T9 261 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 TLCD1Q96CP7 247 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 PWWP2AQ96N64 755 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 NAP1L3Q99457 506 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-207ENST00000533242 CDC6Q99741 560 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 PABPC3Q9H361 631 aaKnown RBP8.49□□□□□ -1.05
NEDD8-207ENST00000533242 DPEP3Q9H4B8 488 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 CCSER2Q9H7U1 834 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 CKAP5Q14008 2032 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 TP53BP1Q12888 1972 aaPredicted RBP8.49□□□□□ -1.05
NEDD8-207ENST00000533242 FAM92AA1XBS5 289 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 GOLGA6L10A6NI86 522 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 FOXO6A8MYZ6 492 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 E7EVH7 732 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 STAU1O95793 577 aaKnown RBP8.49□□□□□ -1.05
NEDD8-207ENST00000533242 IRF1P10914 325 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 TCF4P15884 667 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 MAOBP27338 520 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 GTF2H1P32780 548 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 MATKP42679 507 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 LIG3P49916 1009 aa8.49□□□□□ -1.05
NEDD8-207ENST00000533242 DRG2P55039 364 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms