RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 TFE3P19532 575 aaPredicted RBP18.29■□□□□ 0.52
PCF11-206ENST00000533018 KRT83P78385 493 aa18.29■□□□□ 0.52
PCF11-206ENST00000533018 KLHDC7AQ5VTJ3 777 aa18.29■□□□□ 0.52
PCF11-206ENST00000533018 SMYD5Q6GMV2 418 aa18.29■□□□□ 0.52
PCF11-206ENST00000533018 TMPRSS7Q7RTY8 843 aa18.29■□□□□ 0.52
PCF11-206ENST00000533018 ATP11CQ8NB49 1132 aa18.29■□□□□ 0.52
PCF11-206ENST00000533018 PIP4K2CQ8TBX8 421 aa18.29■□□□□ 0.52
PCF11-206ENST00000533018 ALG14Q96F25 216 aa18.29■□□□□ 0.52
PCF11-206ENST00000533018 NPY6RQ99463 290 aa18.29■□□□□ 0.52
PCF11-206ENST00000533018 SARDHQ9UL12 918 aa18.29■□□□□ 0.52
PCF11-206ENST00000533018 TPX2Q9ULW0 747 aaKnown RBP18.29■□□□□ 0.52
PCF11-206ENST00000533018 SNX10Q9Y5X0 201 aa18.29■□□□□ 0.52
PCF11-206ENST00000533018 ACACAQ13085 2346 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 GOLGA8SH3BPF8 625 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 TLR4O00206 839 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 SLC7A4O43246 635 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 ARRB1P49407 418 aaPredicted RBP18.28■□□□□ 0.52
PCF11-206ENST00000533018 CXCR3P49682 368 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 ALFQ53S48 1182 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 C2CD6Q53TS8 623 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 OTUD1Q5VV17 481 aaPredicted RBP18.28■□□□□ 0.52
PCF11-206ENST00000533018 PROSER1Q86XN7 944 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 MARCH9Q86YJ5 346 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 GALNT15Q8N3T1 639 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 SH2D3CQ8N5H7 860 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 MSANTD4Q8NCY6 345 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 TBCBQ99426 244 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 C2orf49Q9BVC5 232 aaPredicted RBP18.28■□□□□ 0.52
PCF11-206ENST00000533018 KDM4CQ9H3R0 1056 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 SAMSN1Q9NSI8 373 aaKnown RBP18.28■□□□□ 0.52
PCF11-206ENST00000533018 ARHGEF38Q9NXL2 777 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 TBC1D30Q9Y2I9 924 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 OR51B4Q9Y5P0 310 aa18.28■□□□□ 0.52
PCF11-206ENST00000533018 A0A1W2PR77 199 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 TAF4O00268 1085 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 MCF2LO15068 1137 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 PLRG1O43660 514 aaKnown RBP18.27■□□□□ 0.52
PCF11-206ENST00000533018 SNAP91O60641 907 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 SRGAP2O75044 1071 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 UCHL3P15374 230 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 VASPP50552 380 aaPredicted RBP18.27■□□□□ 0.52
PCF11-206ENST00000533018 KCNMA1Q12791 1236 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 CNTN1Q12860 1018 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 SLC25A52Q3SY17 297 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 TFAP2DQ7Z6R9 452 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 MDM1Q8TC05 714 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 CCDC114Q96M63 670 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 ANLNQ9NQW6 1124 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 TMPRSS4Q9NRS4 437 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 MPP6Q9NZW5 540 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 PPM1HQ9ULR3 514 aa18.27■□□□□ 0.52
PCF11-206ENST00000533018 FAM149AA5PLN7 773 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 ALOX15BO15296 676 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 LATO43561 262 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 LDOC1O95751 146 aaPredicted RBP18.26■□□□□ 0.51
PCF11-206ENST00000533018 MT-CO1P00395 513 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 SRCP12931 536 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 OR1E1P30953 314 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 CDH5P33151 784 aaPredicted RBP18.26■□□□□ 0.51
PCF11-206ENST00000533018 GABRB2P47870 512 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 STAT4Q14765 748 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 C5orf22Q49AR2 442 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 TCP11X2Q5H9J9 407 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 C6orf118Q5T5N4 469 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 NAPEPLDQ6IQ20 393 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 DPY19L2P1Q6NXN4 242 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 DHRS13Q6UX07 377 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 SETD3Q86TU7 594 aaPredicted RBP18.26■□□□□ 0.51
PCF11-206ENST00000533018 NOP9Q86U38 636 aaKnown RBP18.26■□□□□ 0.51
PCF11-206ENST00000533018 XYLT1Q86Y38 959 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 EID2Q8N6I1 236 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 CPA5Q8WXQ8 436 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 PGAP3Q96FM1 320 aaPredicted RBP18.26■□□□□ 0.51
PCF11-206ENST00000533018 CNDP2Q96KP4 475 aaKnown RBP18.26■□□□□ 0.51
PCF11-206ENST00000533018 SPON2Q9BUD6 331 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 DYRK4Q9NR20 520 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 VPS51Q9UID3 782 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 LHX6Q9UPM6 363 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 KNTC1P50748 2209 aa18.26■□□□□ 0.51
PCF11-206ENST00000533018 DOCK4Q8N1I0 1966 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 K7ERQ8 282 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 CBX4O00257 560 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 KPNA3O00505 521 aaPredicted RBP18.25■□□□□ 0.51
PCF11-206ENST00000533018 YKT6O15498 198 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 ENDOD1O94919 500 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 LSM8O95777 96 aaKnown RBP18.25■□□□□ 0.51
PCF11-206ENST00000533018 MMEP08473 750 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 RRM1P23921 792 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 FLT3P36888 993 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 NXPH1P58417 271 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 AGBL4Q5VU57 503 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 NAA35Q5VZE5 725 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 LINGO4Q6UY18 593 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 MFSD2AQ8NA29 543 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 SAP25Q8TEE9 199 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 NT5C3BQ969T7 300 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 C1orf74Q96LT6 269 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 CFAP57Q96MR6 1250 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 STK33Q9BYT3 514 aa18.25■□□□□ 0.51
PCF11-206ENST00000533018 TAB2Q9NYJ8 693 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms