RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 RNF219Q5W0B1 726 aaPredicted RBP8.2□□□□□ -1.1
TRIM49-202ENST00000532501 LINGO4Q6UY18 593 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 PSTKQ8IV42 348 aaKnown RBP8.2□□□□□ -1.1
TRIM49-202ENST00000532501 FLCNQ8NFG4 579 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 HAUS1Q96CS2 278 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 NSMCE3Q96MG7 304 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 RNF157Q96PX1 679 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 PNKPQ96T60 521 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 DDX50Q9BQ39 737 aaKnown RBP8.2□□□□□ -1.1
TRIM49-202ENST00000532501 ZNF670Q9BS34 389 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 HEMGNQ9BXL5 484 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 SLC39A8Q9C0K1 460 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 C10orf88Q9H8K7 445 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 DLGAP2Q9P1A6 1054 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 DEC1Q9P2X7 70 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 VPS51Q9UID3 782 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 AMFRQ9UKV5 643 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 R3HDM2Q9Y2K5 976 aaKnown RBP8.2□□□□□ -1.1
TRIM49-202ENST00000532501 SLC27A6Q9Y2P4 619 aa8.2□□□□□ -1.1
TRIM49-202ENST00000532501 GPR179Q6PRD1 2367 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 MUC22E2RYF6 1773 aaPredicted RBP8.19□□□□□ -1.1
TRIM49-202ENST00000532501 ATG2BQ96BY7 2078 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 KIAA1549LQ6ZVL6 1849 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 KANSL1LA0AUZ9 987 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 FAM170BA6NMN3 283 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 RASA4BC9J798 803 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 H0Y626 953 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 J3KR12 359 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 RASA4O43374 803 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 SMAD6O43541 496 aaKnown RBP8.19□□□□□ -1.1
TRIM49-202ENST00000532501 CLDN11O75508 207 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 GJB3O75712 270 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 PEX11BO96011 259 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 KRT7P08729 469 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 HLA-EP13747 358 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 PRKCHP24723 683 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 OR1E1P30953 314 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 CXCR5P32302 372 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 EIF2DP41214 584 aaKnown RBP8.19□□□□□ -1.1
TRIM49-202ENST00000532501 IL12RB1P42701 662 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 NRLP54845 237 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 GNA12Q03113 381 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 PRKCQQ04759 706 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 KAZNQ674X7 775 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 MBLAC2Q68D91 279 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 SLC9A4Q6AI14 798 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 LRRC31Q6UY01 552 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 TMEM105Q8N8V8 129 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 KCTD6Q8NC69 237 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 PJA1Q8NG27 643 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 USP33Q8TEY7 942 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 ARHGEF2Q92974 986 aaKnown RBP8.19□□□□□ -1.1
TRIM49-202ENST00000532501 RPL10LQ96L21 214 aaKnown RBP8.19□□□□□ -1.1
TRIM49-202ENST00000532501 FEM1AQ9BSK4 669 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 ACE2Q9BYF1 805 aaPredicted RBP8.19□□□□□ -1.1
TRIM49-202ENST00000532501 PDFQ9HBH1 243 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 CD248Q9HCU0 757 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 CACNA2D2Q9NY47 1150 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 DTLQ9NZJ0 730 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 SLCO3A1Q9UIG8 710 aa8.19□□□□□ -1.1
TRIM49-202ENST00000532501 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.19□□□□□ -1.1
TRIM49-202ENST00000532501 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.18□□□□□ -1.1
TRIM49-202ENST00000532501 ILVBLA1L0T0 632 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 CCDC66A2RUB6 948 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 TBC1D3BA6NDS4 549 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 MIF4GDA9UHW6 222 aaKnown RBP8.18□□□□□ -1.1
TRIM49-202ENST00000532501 KIF2AO00139 706 aaPredicted RBP8.18□□□□□ -1.1
TRIM49-202ENST00000532501 SGK1O00141 431 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 MUSKO15146 869 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 ZNF185O15231 689 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 RAMP2O60895 175 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 ZNF821O75541 412 aaPredicted RBP8.18□□□□□ -1.1
TRIM49-202ENST00000532501 APODP05090 189 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 ARL4AP40617 200 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 GRIA2P42262 883 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 RGRP47804 291 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 HCAR3P49019 387 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 MAPKAPK2P49137 400 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 PAPOLAP51003 745 aaKnown RBP8.18□□□□□ -1.1
TRIM49-202ENST00000532501 NR1H3Q13133 447 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 ZNF177Q13360 481 aaPredicted RBP8.18□□□□□ -1.1
TRIM49-202ENST00000532501 ZNF234Q14588 700 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 IHHQ14623 411 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 PAFAH1B3Q15102 231 aaKnown RBP8.18□□□□□ -1.1
TRIM49-202ENST00000532501 SIX1Q15475 284 aaPredicted RBP8.18□□□□□ -1.1
TRIM49-202ENST00000532501 C2orf27AQ580R0 203 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 ODF2Q5BJF6 829 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 ZFYVE27Q5T4F4 411 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 TTC39BQ5VTQ0 682 aaPredicted RBP8.18□□□□□ -1.1
TRIM49-202ENST00000532501 KIAA1211LQ6NV74 962 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 C1orf228Q6PIY5 440 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 ZNF852Q6ZMS4 543 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 RFX6Q8HWS3 928 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 UMODL1-AS1Q8N2C9 162 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 ALLCQ8N6M5 410 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 IL17RCQ8NAC3 791 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 EXD1Q8NHP7 514 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 COG1Q8WTW3 980 aa8.18□□□□□ -1.1
TRIM49-202ENST00000532501 TTC17Q96AE7 1141 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms