RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ACBD6Q9BR61 282 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 GANQ9H2C0 597 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 RAD54BQ9Y620 910 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 KRT87PA6NCN2 255 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 GJB6O95452 261 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 EPHX1P07099 455 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 TYMPP19971 482 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 GALNTL6Q49A17 601 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 HLA-DQA1Q5Y7H0 255 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 SEL1L3Q68CR1 1132 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 KIF2BQ8N4N8 673 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 C7orf43Q8WVR3 580 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 KAT5Q92993 513 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 CNDP1Q96KN2 507 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 CYP4F12Q9HCS2 524 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 HEY2Q9UBP5 337 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 SOX13Q9UN79 622 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 RASSF10A6NK89 507 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 EIF4E1BA6NMX2 242 aaKnown RBP11.48□□□□□ -0.57
PTPRK-221ENST00000532331 GRK2P25098 689 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 GRM3Q14832 879 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 TEAD4Q15561 434 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 TIGD5Q53EQ6 642 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 OTOP3Q7RTS5 596 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 GALNT4Q8N4A0 578 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 NCKIPSDQ9NZQ3 722 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 FSHRP23945 695 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 TKTP29401 623 aaKnown RBP11.48□□□□□ -0.57
PTPRK-221ENST00000532331 CSHL1Q14406 222 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 WLSQ5T9L3 541 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 CHST9Q7L1S5 443 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 SLC22A9Q8IVM8 553 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 STK40Q8N2I9 435 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 PHF21AQ96BD5 680 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 ZFYVE19Q96K21 471 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 ACTR8Q9H981 624 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 EFCAB1Q9HAE3 211 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 CACNA2D2Q9NY47 1150 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 PLK2Q9NYY3 685 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 PNMA8BQ9ULN7 279 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-221ENST00000532331 STARD13Q9Y3M8 1113 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 PCDHA3Q9Y5H8 950 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 GNG14A0A1W2PPG7 69 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 MGAT4DA6NG13 374 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 CES2O00748 559 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 MPOP05164 745 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 CPA3P15088 417 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 CAPZA2P47755 286 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 CD151P48509 253 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 SERPINH1P50454 418 aaKnown RBP11.48□□□□□ -0.57
PTPRK-221ENST00000532331 SEC13P55735 322 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 FUT2Q10981 343 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 DYNC1I2Q13409 638 aaKnown RBP11.48□□□□□ -0.57
PTPRK-221ENST00000532331 PXYLP1Q8TE99 480 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 BSNDQ8WZ55 320 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 NDEL1Q9GZM8 345 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 ELOVL6Q9H5J4 265 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 SCN3BQ9NY72 215 aa11.48□□□□□ -0.57
PTPRK-221ENST00000532331 TM9SF1O15321 606 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 CLDN11O75508 207 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 TPBGLP0DKB5 382 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 MATKP42679 507 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 GAD2Q05329 585 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 SLC51AQ86UW1 340 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 MTMR8Q96EF0 704 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 TAS2R13Q9NYV9 303 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 A0A088AWK7 358 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 RAD51BO15315 384 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 ZBTB14O43829 449 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 BMP10O95393 424 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 GUCA1CO95843 209 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 ZNF10P21506 573 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-221ENST00000532331 CD86P42081 329 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 SLC5A3P53794 718 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 IL17AQ16552 155 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 ECM1Q16610 540 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 TPGS2Q68CL5 300 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 DNAAF5Q86Y56 855 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 BTN2A3PQ96KV6 586 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 TMEM175Q9BSA9 504 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 MAN1A2O60476 641 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 RASSF9O75901 435 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 GLI1P08151 1106 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 TMCO5AQ8N6Q1 288 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 ZNF614Q8N883 585 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 TLR9Q9NR96 1032 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 NR2E1Q9Y466 385 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 V9GYQ6 96 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 IGLV3-22A0A075B6J6 115 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 PSMA4P25789 261 aaKnown RBP11.47□□□□□ -0.57
PTPRK-221ENST00000532331 SERPINB5P36952 375 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 PSMD8P48556 350 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 FUT11Q495W5 492 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 P3H2Q8IVL5 708 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 EPS8L1Q8TE68 723 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 SAMD11Q96NU1 681 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 ARHGAP28Q9P2N2 729 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 DNAJC16Q9Y2G8 782 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 H3BMM5 538 aa11.47□□□□□ -0.57
PTPRK-221ENST00000532331 DDX3XO00571 662 aaKnown RBP eCLIP11.47□□□□□ -0.571e-9■□□□□ 10.8
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms