RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 CLPBQ9H078 707 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 C1orf21Q9H246 121 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 EPC1Q9H2F5 836 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 TTYH1Q9H313 450 aaPredicted RBP4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 MMADHCQ9H3L0 296 aaPredicted RBP4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 SLC32A1Q9H598 525 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 DENND2DQ9H6A0 471 aaPredicted RBP4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 SCPEP1Q9HB40 452 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 SNTG1Q9NSN8 517 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 RRP7BPQ9NSQ0 103 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 IL1RAPL1Q9NZN1 696 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 DLGAP2Q9P1A6 1054 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 NCDNQ9UBB6 729 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 DNAJB9Q9UBS3 223 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 RAB21Q9UL25 225 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 CTNND2Q9UQB3 1225 aa4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 MRPS17Q9Y2R5 130 aaKnown RBP4.54□□□□□ -1.68
AC055878.1-201ENST00000531858 SYNJ2BP-COX16A0A087WUM0 186 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 DNM1LO00429 736 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 ZNF213O14771 459 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 ZNF263O14978 683 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 LDLRAD4O15165 306 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 PRPF4O43172 522 aaKnown RBP eCLIP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 KINO60870 393 aaKnown RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 RTN2O75298 545 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 NDUFS3O75489 264 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 OLFM2O95897 454 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 LMNAP02545 664 aaKnown RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 ITGB1P05556 798 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 IRF1P10914 325 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 SRCP12931 536 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 C6P13671 934 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 RPS2P15880 293 aaKnown RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 GAP43P17677 238 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 SLC6A2P23975 617 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 FMO4P31512 558 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 GJC1P36383 396 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 CASP3P42574 277 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 ANXA11P50995 505 aaKnown RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 TAS2R50P59544 299 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 CAMK2DQ13557 499 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 HLXQ14774 488 aaPredicted RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 LASP1Q14847 261 aaKnown RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 FAM187BQ17R55 369 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 HYAL4Q2M3T9 481 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 DCAF17Q5H9S7 520 aaPredicted RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 NOMO2Q5JPE7 1267 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 TOR1AIP1Q5JTV8 583 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 ARHGAP40Q5TG30 622 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 GKAP1Q5VSY0 366 aaPredicted RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 ANKS6Q68DC2 871 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 RGS7BPQ6MZT1 257 aaPredicted RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 ACSM6Q6P461 480 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 UNC5DQ6UXZ4 953 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 GLDNQ6ZMI3 551 aaPredicted RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 TUSC5Q8IXB3 177 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 HACE1Q8IYU2 909 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 IZUMO1Q8IYV9 350 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 FAM109AQ8N4B1 249 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 OR52L2PQ8NGH6 319 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 SPATA18Q8TC71 538 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 KRT35Q92764 455 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 ZNF622Q969S3 477 aaKnown RBP eCLIP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 RPL10LQ96L21 214 aaKnown RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 AK8Q96MA6 479 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 HAPLN3Q96S86 360 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 CTDSP1Q9GZU7 261 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 XYLT2Q9H1B5 865 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 ZNF552Q9H707 407 aaPredicted RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 L2HGDHQ9H9P8 463 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 WSB2Q9NYS7 404 aaPredicted RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 FBXL17Q9UF56 701 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 COPG1Q9Y678 874 aaKnown RBP4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 POMT1Q9Y6A1 747 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 FPGT-TNNI3KV9GXZ4 949 aa4.53□□□□□ -1.68
AC055878.1-201ENST00000531858 IGSF1Q8N6C5 1336 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 UBE2QL1A1L167 161 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 URADA6NGE7 173 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 DBX1A6NMT0 343 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 DRGXA6NNA5 263 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 M0QYT0 321 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 FFAR3O14843 346 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 GPR42O15529 346 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 PAPSS1O43252 624 aaPredicted RBP4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 TXNL1O43396 289 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 HCRTR2O43614 444 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 TRIAP1O43715 76 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 PRPSAP2O60256 369 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 HBP1O60381 514 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 GUCA1CO95843 209 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 PCP11498 1178 aaKnown RBP4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 ARSAP15289 507 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 ATF2P15336 505 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 KCNA2P16389 499 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 KCNA5P22460 613 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 CD6P30203 668 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 HOXA10P31260 410 aaPredicted RBP4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 VIPR1P32241 457 aa4.52□□□□□ -1.69
AC055878.1-201ENST00000531858 CSF2RBP32927 897 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms