RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 RTN4Q9NQC3 1192 aaKnown RBP12.89□□□□□ -0.35
C11orf54-210ENST00000531516 FSCN3Q9NQT6 498 aa12.89□□□□□ -0.35
C11orf54-210ENST00000531516 AASDHPPTQ9NRN7 309 aa12.89□□□□□ -0.35
C11orf54-210ENST00000531516 MPP6Q9NZW5 540 aa12.89□□□□□ -0.35
C11orf54-210ENST00000531516 HS3ST2Q9Y278 367 aa12.89□□□□□ -0.35
C11orf54-210ENST00000531516 ABCA7Q8IZY2 2146 aa12.89□□□□□ -0.35
C11orf54-210ENST00000531516 MYO18AQ92614 2054 aaKnown RBP12.89□□□□□ -0.35
C11orf54-210ENST00000531516 DCHS1Q96JQ0 3298 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 A0A1W2PQC6 194 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 C2CD4BA6NLJ0 364 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 CBX4O00257 560 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 MAGEC1O60732 1142 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 CNTN5O94779 1100 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 TRIM16O95361 564 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 ZNF883P0CG24 379 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 MAPKAPK2P49137 400 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 CSNK1EP49674 416 aaKnown RBP12.88□□□□□ -0.35
C11orf54-210ENST00000531516 CCR5P51681 352 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 GALCP54803 685 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 AIF1P55008 147 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 RACK1P63244 317 aaKnown RBP12.88□□□□□ -0.35
C11orf54-210ENST00000531516 KLHL40Q2TBA0 621 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 CCDC14Q49A88 953 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 ALFQ53S48 1182 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 EFHC2Q5JST6 749 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 SFMBT2Q5VUG0 894 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 OTUD1Q5VV17 481 aaPredicted RBP12.88□□□□□ -0.35
C11orf54-210ENST00000531516 ACAD10Q6JQN1 1059 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 SCYL2Q6P3W7 929 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 NCEH1Q6PIU2 408 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 Q6ZVU0 165 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 SLFN11Q7Z7L1 901 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 PHLDB2Q86SQ0 1253 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 VPS36Q86VN1 386 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 ZNF354CQ86Y25 554 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 DRC7Q8IY82 874 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 SETD7Q8WTS6 366 aaKnown RBP12.88□□□□□ -0.35
C11orf54-210ENST00000531516 TBC1D31Q96DN5 1066 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 VCPIP1Q96JH7 1222 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 FAM129BQ96TA1 746 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 EPAS1Q99814 870 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 EDEM3Q9BZQ6 932 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 TM9SF3Q9HD45 589 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 PARVAQ9NVD7 372 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 EML5Q05BV3 1969 aa12.88□□□□□ -0.35
C11orf54-210ENST00000531516 CXorf51AA0A1B0GTR3 108 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 A0A1B0GVT2 93 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 A0A1W2PPC4 97 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 PLEKP08567 350 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-210ENST00000531516 RHOQP17081 205 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 RFC1P35251 1148 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-210ENST00000531516 NUMBP49757 651 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 DNA2P51530 1060 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 IRAK1P51617 712 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 ZNF143P52747 638 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-210ENST00000531516 SIM1P81133 766 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-210ENST00000531516 NRG1Q02297 640 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-210ENST00000531516 GNA12Q03113 381 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 KLHL30Q0D2K2 578 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 POLD3Q15054 466 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-210ENST00000531516 ZNF423Q2M1K9 1284 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 C15orf59Q2T9L4 293 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-210ENST00000531516 SKOR2Q2VWA4 1001 aaPredicted RBP12.87□□□□□ -0.35
C11orf54-210ENST00000531516 HLA-BQ31612 363 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 PIP4K2CQ8TBX8 421 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 FRS2Q8WU20 508 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 NTAN1Q96AB6 310 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 IQCDQ96DY2 449 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 ALG14Q96F25 216 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 TRIM11Q96F44 468 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 PCDHB18PQ96TA0 734 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 NCAPGQ9BPX3 1015 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 CNPY3Q9BT09 278 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 CEP44Q9C0F1 390 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 CATSPERBQ9H7T0 1116 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 TM7SF3Q9NS93 570 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 VPS51Q9UID3 782 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 ANKRD6Q9Y2G4 727 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 PCDHGB2Q9Y5G2 931 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 OR51B4Q9Y5P0 310 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 SNX10Q9Y5X0 201 aa12.87□□□□□ -0.35
C11orf54-210ENST00000531516 SYCE3A1L190 88 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 ZSCAN5CA6NGD5 496 aaPredicted RBP12.86□□□□□ -0.35
C11orf54-210ENST00000531516 KPNA3O00505 521 aaPredicted RBP12.86□□□□□ -0.35
C11orf54-210ENST00000531516 YKT6O15498 198 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 FLRT2O43155 660 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 SNAP91O60641 907 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 RAMP2O60895 175 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 RNF8O76064 485 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 SRCP12931 536 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 PMLP29590 882 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 CHRNA3P32297 505 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 CCT8P50990 548 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 ADPRHP54922 357 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 SHC2P98077 582 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 FOXC1Q12948 553 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 TRIP6Q15654 476 aaKnown RBP12.86□□□□□ -0.35
C11orf54-210ENST00000531516 WDR59Q6PJI9 974 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 MON1BQ7L1V2 547 aa12.86□□□□□ -0.35
C11orf54-210ENST00000531516 APTXQ7Z2E3 356 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms