RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CTSOP43234 321 aaPredicted RBP14.81□□□□□ -0.04
CPSF1-206ENST00000531480 SSR1P43307 286 aaKnown RBP14.81□□□□□ -0.04
CPSF1-206ENST00000531480 DGKEP52429 567 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 SERINC3Q13530 473 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 POLD3Q15054 466 aaPredicted RBP14.81□□□□□ -0.04
CPSF1-206ENST00000531480 NT5DC3Q86UY8 548 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 RASSF3Q86WH2 238 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 KATNAL2Q8IYT4 538 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 CHPFQ8IZ52 775 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 CCDC33Q8N5R6 958 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 NPWQ8N729 165 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 KCTD6Q8NC69 237 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 OR7D4Q8NG98 312 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 PCDH19Q8TAB3 1148 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 FRS2Q8WU20 508 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 CYB5D2Q8WUJ1 264 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 PRDM16Q9HAZ2 1276 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 ZDHHC4Q9NPG8 344 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 ETNK2Q9NVF9 386 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 CACNA2D2Q9NY47 1150 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 EBF1Q9UH73 591 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 CAPN6Q9Y6Q1 641 aa14.81□□□□□ -0.04
CPSF1-206ENST00000531480 MACROD2A1Z1Q3 448 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 WASH3PC4AMC7 463 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 RASA4BC9J798 803 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 H0Y858 1186 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 RASA4O43374 803 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 LAMTOR5O43504 91 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 KDELR3O43731 214 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 SNAP91O60641 907 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 AMPD1P23109 780 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 PRKCHP24723 683 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 CTNNA2P26232 953 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 ACVRL1P37023 503 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 PEX5P50542 639 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 ARF5P84085 180 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 SLC20A2Q08357 652 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 MMRN1Q13201 1228 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 CAMK2GQ13555 558 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-206ENST00000531480 KRT81Q14533 505 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 PAFAH1B3Q15102 231 aaKnown RBP14.8□□□□□ -0.04
CPSF1-206ENST00000531480 ANGPT1Q15389 498 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 HNRNPA1L2Q32P51 320 aaKnown RBP14.8□□□□□ -0.04
CPSF1-206ENST00000531480 ANKRD20A8PQ5CZ79 823 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 SYCE1Q8N0S2 351 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 SH2D3CQ8N5H7 860 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 PQLC3Q8N755 202 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 FAM126AQ9BYI3 521 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-206ENST00000531480 ATP13A1Q9HD20 1204 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 POLR3BQ9NW08 1133 aaPredicted RBP14.8□□□□□ -0.04
CPSF1-206ENST00000531480 SLCO3A1Q9UIG8 710 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 PCDHA3Q9Y5H8 950 aa14.8□□□□□ -0.04
CPSF1-206ENST00000531480 CCDC66A2RUB6 948 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 DAPK3O43293 454 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 PALMO75781 387 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 HOXB2P14652 356 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 GLDCP23378 1020 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 CDKN2BP42772 138 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 MARCKSL1P49006 195 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 STK19P49842 368 aaPredicted RBP14.79□□□□□ -0.04
CPSF1-206ENST00000531480 CLCN6P51797 869 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 NCBP2-AS2Q69YL0 99 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 SLC9A4Q6AI14 798 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 SDE2Q6IQ49 451 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 KIAA1211LQ6NV74 962 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 TMCO3Q6UWJ1 677 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 SERPINA13PQ6UXR4 307 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 EXD1Q8NHP7 514 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 PIEZO1Q92508 2521 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 KRT35Q92764 455 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 ATOH1Q92858 354 aaPredicted RBP14.79□□□□□ -0.04
CPSF1-206ENST00000531480 HMCESQ96FZ2 354 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 ZNF830Q96NB3 372 aaPredicted RBP14.79□□□□□ -0.04
CPSF1-206ENST00000531480 RNF157Q96PX1 679 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 SLC39A8Q9C0K1 460 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 PDFQ9HBH1 243 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 KLHL11Q9NVR0 708 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 SLC8A2Q9UPR5 921 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 MFHAS1Q9Y4C4 1052 aa14.79□□□□□ -0.04
CPSF1-206ENST00000531480 TARSL2A2RTX5 802 aaKnown RBP14.78□□□□□ -0.04
CPSF1-206ENST00000531480 LRRD1A4D1F6 860 aa14.78□□□□□ -0.04
CPSF1-206ENST00000531480 ZSCAN5CA6NGD5 496 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-206ENST00000531480 MIF4GDA9UHW6 222 aaKnown RBP14.78□□□□□ -0.04
CPSF1-206ENST00000531480 ZNF821O75541 412 aaPredicted RBP14.78□□□□□ -0.04
CPSF1-206ENST00000531480 MT-CO1P00395 513 aa14.78□□□□□ -0.04
CPSF1-206ENST00000531480 SP9P0CG40 484 aa14.78□□□□□ -0.04
CPSF1-206ENST00000531480 SRCP12931 536 aa14.78□□□□□ -0.04
CPSF1-206ENST00000531480 SERPINB6P35237 376 aa14.78□□□□□ -0.04
CPSF1-206ENST00000531480 GJC1P36383 396 aa14.78□□□□□ -0.04
CPSF1-206ENST00000531480 SERPINH1P50454 418 aaKnown RBP14.78□□□□□ -0.04
CPSF1-206ENST00000531480 COPAP53621 1224 aa14.78□□□□□ -0.04
CPSF1-206ENST00000531480 NAP1L1P55209 391 aaKnown RBP14.78□□□□□ -0.04
CPSF1-206ENST00000531480 GEMIN4P57678 1058 aaKnown RBP14.78□□□□□ -0.04
CPSF1-206ENST00000531480 ST8SIA6P61647 398 aa14.78□□□□□ -0.04
CPSF1-206ENST00000531480 FNDC3BQ53EP0 1204 aaKnown RBP14.78□□□□□ -0.04
CPSF1-206ENST00000531480 RETSATQ6NUM9 610 aa14.78□□□□□ -0.04
CPSF1-206ENST00000531480 LRRC49Q8IUZ0 686 aa14.78□□□□□ -0.04
CPSF1-206ENST00000531480 REXO1L1PQ8IX06 675 aa14.78□□□□□ -0.04
CPSF1-206ENST00000531480 RCOR2Q8IZ40 523 aa14.78□□□□□ -0.04
CPSF1-206ENST00000531480 ZBTB44Q8NCP5 570 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms