RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 ARL15Q9NXU5 204 aa4.78□□□□□ -1.64
PTPRK-220ENST00000531466 MALT1Q9UDY8 824 aa4.78□□□□□ -1.64
PTPRK-220ENST00000531466 CYP3A7-CYP3A51PA0A087WV96 503 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 APOL1O14791 398 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 CYP3A4P08684 503 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 CYP3A7P24462 503 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 C21orf33P30042 268 aaPredicted RBP4.77□□□□□ -1.65
PTPRK-220ENST00000531466 GLIPR1P48060 266 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 FAM3BP58499 235 aaPredicted RBP4.77□□□□□ -1.65
PTPRK-220ENST00000531466 ARL16Q0P5N6 197 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 SLC30A9Q6PML9 568 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 SMIM29Q86T20 159 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 LMNTD1Q8N9Z9 388 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 CLEC4CQ8WTT0 213 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 SLC35F5Q8WV83 523 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 REXO5Q96IC2 774 aaKnown RBP4.77□□□□□ -1.65
PTPRK-220ENST00000531466 IL17FQ96PD4 163 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 SLC25A33Q9BSK2 321 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 HIPK3Q9H422 1215 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 GAREM1Q9H706 876 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 ZDHHC7Q9NXF8 308 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 DTNAQ9Y4J8 743 aa4.77□□□□□ -1.65
PTPRK-220ENST00000531466 SRPRBQ9Y5M8 271 aaKnown RBP4.77□□□□□ -1.65
PTPRK-220ENST00000531466 PCDH17O14917 1159 aa4.76□□□□□ -1.65
PTPRK-220ENST00000531466 UNGP13051 313 aaPredicted RBP4.76□□□□□ -1.65
PTPRK-220ENST00000531466 STT3AP46977 705 aa4.76□□□□□ -1.65
PTPRK-220ENST00000531466 CYP2J2P51589 502 aa4.76□□□□□ -1.65
PTPRK-220ENST00000531466 CRIP2P52943 208 aaPredicted RBP4.76□□□□□ -1.65
PTPRK-220ENST00000531466 SNTA1Q13424 505 aa4.76□□□□□ -1.65
PTPRK-220ENST00000531466 PMS2CLQ68D20 193 aa4.76□□□□□ -1.65
PTPRK-220ENST00000531466 ANKS1BQ7Z6G8 1248 aa4.76□□□□□ -1.65
PTPRK-220ENST00000531466 TXLNBQ8N3L3 684 aa4.76□□□□□ -1.65
PTPRK-220ENST00000531466 GFM1Q96RP9 751 aaKnown RBP4.76□□□□□ -1.65
PTPRK-220ENST00000531466 HELLSQ9NRZ9 838 aa4.76□□□□□ -1.65
PTPRK-220ENST00000531466 COPG1Q9Y678 874 aaKnown RBP4.76□□□□□ -1.65
PTPRK-220ENST00000531466 EID1Q9Y6B2 187 aa4.76□□□□□ -1.65
PTPRK-220ENST00000531466 SAA2-SAA4A0A096LPE2 208 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 IGHV4-28A0A0C4DH34 117 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 LDLRP01130 860 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 GM2AP17900 193 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 CASP5P51878 434 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 CDH12P55289 794 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 PKP1Q13835 747 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 TRABD2AQ86V40 505 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 TMEM200AQ86VY9 491 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 ZNF333Q96JL9 665 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 CCDC134Q9H6E4 229 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 OBP2AQ9NY56 170 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 AGO1Q9UL18 857 aaKnown RBP4.75□□□□□ -1.65
PTPRK-220ENST00000531466 CA14Q9ULX7 337 aa4.75□□□□□ -1.65
PTPRK-220ENST00000531466 TBC1D3DA0A087WVF3 549 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 TBC1D3IA0A087WXS9 549 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 TBC1D3EA0A087X179 549 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 TBC1D3KA0A087X1G2 549 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 LOC105371045A0A1W2PR82 267 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 TBC1D3BA6NDS4 549 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 TBC1D3FA6NER0 549 aaPredicted RBP4.74□□□□□ -1.65
PTPRK-220ENST00000531466 TBC1D3LB9A6J9 549 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 ITM2AO43736 263 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 XPNPEP2O43895 674 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 RPP40O75818 363 aaKnown RBP4.74□□□□□ -1.65
PTPRK-220ENST00000531466 TBC1D3HP0C7X1 549 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 AMD1P17707 334 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 LCE3CQ5T5A8 94 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 TBC1D3GQ6DHY5 549 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 TBC1D3CQ6IPX1 549 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 MON1BQ7L1V2 547 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 TBC1D3Q8IZP1 549 aaPredicted RBP4.74□□□□□ -1.65
PTPRK-220ENST00000531466 MYO1HQ8N1T3 1032 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 TXNDC15Q96J42 360 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 COLEC11Q9BWP8 271 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 TMEM120AQ9BXJ8 343 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 PKP3Q9Y446 797 aa4.74□□□□□ -1.65
PTPRK-220ENST00000531466 GOLGA6CA6NDK9 693 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 GOLGA6BA6NDN3 693 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 PRAC2D3DTV9 90 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 TMCC1O94876 653 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 AFPP02771 609 aaKnown RBP4.73□□□□□ -1.65
PTPRK-220ENST00000531466 GOLGA6DP0CG33 693 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 RNASELQ05823 741 aaKnown RBP4.73□□□□□ -1.65
PTPRK-220ENST00000531466 MYBPHQ13203 477 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 GFOD2Q3B7J2 385 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 PLK5Q496M5 336 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 FAM171A1Q5VUB5 890 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 FBXO38Q6PIJ6 1188 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 C9orf139Q6ZV77 190 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 EXOC3L1Q86VI1 746 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 CTCFLQ8NI51 663 aaPredicted RBP4.73□□□□□ -1.65
PTPRK-220ENST00000531466 C1QTNF5Q9BXJ0 243 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 EIF2AQ9BY44 585 aaKnown RBP4.73□□□□□ -1.65
PTPRK-220ENST00000531466 ABHD16BQ9H3Z7 469 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 GOLGA6AQ9NYA3 693 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 CDH22Q9UJ99 828 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 ZBTB1Q9Y2K1 713 aa4.73□□□□□ -1.65
PTPRK-220ENST00000531466 KIF28PB7ZC32 967 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 TULP2O00295 520 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 HSPB6O14558 160 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 CLGNO14967 610 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 TSPAN6O43657 245 aa4.72□□□□□ -1.65
PTPRK-220ENST00000531466 NTSR2O95665 410 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms