RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 DMAP1Q9NPF5 467 aaPredicted RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 ARHGEF4Q9NR80 690 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 DNAJC17Q9NVM6 304 aaKnown RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 DTLQ9NZJ0 730 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 KLHL14Q9P2G3 628 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 IGSF9Q9P2J2 1179 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 KANSL3Q9P2N6 904 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 SAE1Q9UBE0 346 aaPredicted RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 ZC3H7BQ9UGR2 993 aaKnown RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 FBXW11Q9UKB1 542 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 TRHDEQ9UKU6 1024 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 HEY1Q9Y5J3 304 aa5.72□□□□□ -1.49
PCF11-205ENST00000530906 GOLGB1Q14789 3259 aaKnown RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 TDRD15B5MCY1 1934 aaKnown RBP5.72□□□□□ -1.49
PCF11-205ENST00000530906 MAGEB16A2A368 324 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 SDR42E2A6NKP2 422 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 FAM159BA6NKW6 160 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 TCP11X1B4DZS4 312 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 M0QYT0 321 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 EEF2KO00418 725 aaKnown RBP5.71□□□□□ -1.5
PCF11-205ENST00000530906 DCLK1O15075 740 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 FGF10O15520 208 aaPredicted RBP5.71□□□□□ -1.5
PCF11-205ENST00000530906 ALDH1A2O94788 518 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 TGDSO95455 350 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 APOEP02649 317 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 ASGR1P07306 291 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 APRTP07741 180 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 TROVE2P10155 538 aaKnown RBP eCLIP5.71□□□□□ -1.5
PCF11-205ENST00000530906 SLC2A3P11169 496 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 ACPPP15309 386 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 TAC1P20366 129 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 SSTR1P30872 391 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 GRIK1P39086 918 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 CCNFP41002 786 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 IFNAR2P48551 515 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 CXCR3P49682 368 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 FLT3LGP49771 235 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 PRMT2P55345 433 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 YWHAGP61981 247 aaKnown RBP eCLIP5.71□□□□□ -1.5
PCF11-205ENST00000530906 GBE1Q04446 702 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 SMARCB1Q12824 385 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 PKN2Q16513 984 aaKnown RBP5.71□□□□□ -1.5
PCF11-205ENST00000530906 NFE2Q16621 373 aaPredicted RBP5.71□□□□□ -1.5
PCF11-205ENST00000530906 CA9Q16790 459 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 ANKRD20A2Q5SQ80 823 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 UBAP2Q5T6F2 1119 aaKnown RBP5.71□□□□□ -1.5
PCF11-205ENST00000530906 MAP3K21Q5TCX8 1036 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 ANKRD20A1Q5TYW2 823 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 ANKRD20A3Q5VUR7 823 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 ANKRD34AQ69YU3 496 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 LRRC8BQ6P9F7 803 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 GLB1LQ6UWU2 654 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 XKR5Q6UX68 686 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 NPNTQ6UXI9 565 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 TIFABQ6ZNK6 161 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 BEND4Q6ZU67 534 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 PAQR9Q6ZVX9 377 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 PRUNE1Q86TP1 453 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 CAND1Q86VP6 1230 aaKnown RBP5.71□□□□□ -1.5
PCF11-205ENST00000530906 ATCAYQ86WG3 371 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 DCP1BQ8IZD4 617 aaKnown RBP5.71□□□□□ -1.5
PCF11-205ENST00000530906 ARHGAP18Q8N392 663 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 LZTR1Q8N653 840 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 CCDC185Q8N715 623 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 ANKRD42Q8N9B4 389 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 BANPQ8N9N5 519 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 SHKBP1Q8TBC3 707 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 URGCPQ8TCY9 931 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 MZB1Q8WU39 189 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 CDKL2Q92772 493 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 FATE1Q969F0 183 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 HDAC11Q96DB2 347 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 PCED1BQ96HM7 432 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 CEP295NLQ96MC4 621 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 PWWP2AQ96N64 755 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 HAPLN3Q96S86 360 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 SMOQ99835 787 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 ELAC2Q9BQ52 826 aaKnown RBP5.71□□□□□ -1.5
PCF11-205ENST00000530906 TUBB6Q9BUF5 446 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 PITPNM3Q9BZ71 974 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 IQCGQ9H095 443 aaKnown RBP5.71□□□□□ -1.5
PCF11-205ENST00000530906 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.71□□□□□ -1.5
PCF11-205ENST00000530906 OSBPL2Q9H1P3 480 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 CXCL16Q9H2A7 254 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 RETREG1Q9H6L5 497 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 RXFP1Q9HBX9 757 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 NMRK2Q9NPI5 230 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 CRTAC1Q9NQ79 661 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 FGFR1OP2Q9NVK5 253 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 GPATCH2LQ9NWQ4 482 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 CTNNAL1Q9UBT7 734 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 SEPT3Q9UH03 358 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 TBK1Q9UHD2 729 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 PADI3Q9ULW8 664 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 SLC12A4Q9UP95 1085 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 CHMP2BQ9UQN3 213 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 USH1CQ9Y6N9 552 aa5.71□□□□□ -1.5
PCF11-205ENST00000530906 THSD7BQ9C0I4 1608 aa5.7□□□□□ -1.5
PCF11-205ENST00000530906 PTPRDP23468 1912 aa5.7□□□□□ -1.5
PCF11-205ENST00000530906 TCRBV7S3A2A0A539 114 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms