RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 RHDQ02161 417 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 CHRNEQ04844 493 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 MERTKQ12866 999 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 FXNQ16595 210 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 PPM1JQ5JR12 505 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 DCP2Q8IU60 420 aaKnown RBP14.39□□□□□ -0.11
PCF11-204ENST00000530660 TNS4Q8IZW8 715 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 LPGAT1Q92604 370 aa14.39□□□□□ -0.11
PCF11-204ENST00000530660 MOV10Q9HCE1 1003 aaKnown RBP14.39□□□□□ -0.11
PCF11-204ENST00000530660 TPST1O60507 370 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 NCAM1P13591 858 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 SREBF1P36956 1147 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 ZNF135P52742 658 aaPredicted RBP14.38□□□□□ -0.11
PCF11-204ENST00000530660 P2RX3P56373 397 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 NME5P56597 212 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 FNIP1Q8TF40 1166 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 MCEEQ96PE7 176 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 B3GNT4Q9C0J1 378 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 POPDC2Q9HBU9 364 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 AKIP1Q9NQ31 210 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 DDX4Q9NQI0 724 aaKnown RBP14.38□□□□□ -0.11
PCF11-204ENST00000530660 SRP68Q9UHB9 627 aaKnown RBP14.38□□□□□ -0.11
PCF11-204ENST00000530660 SATB2Q9UPW6 733 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 SCO2O43819 266 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 MFSD14BQ5SR56 506 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 KRT39Q6A163 491 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 OTOP1Q7RTM1 612 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 DAW1Q8N136 415 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 RP9Q8TA86 221 aaKnown RBP14.38□□□□□ -0.11
PCF11-204ENST00000530660 TRIB2Q92519 343 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 FIG4Q92562 907 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 FAF2Q96CS3 445 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 COQ7Q99807 217 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 EMILIN2Q9BXX0 1053 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 LHPPQ9H008 270 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 THG1LQ9NWX6 298 aaKnown RBP14.38□□□□□ -0.11
PCF11-204ENST00000530660 SEL1LQ9UBV2 794 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 UBE4BO95155 1302 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 ARHGAP33O14559 1287 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 ASNA1O43681 348 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 IDH3BO43837 385 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 ALX3O95076 343 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 TRIM25Q14258 630 aaKnown RBP14.38□□□□□ -0.11
PCF11-204ENST00000530660 NAPRTQ6XQN6 538 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 PRR23CQ6ZRP0 262 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 LRRC49Q8IUZ0 686 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 BEND7Q8N7W2 519 aaPredicted RBP14.38□□□□□ -0.11
PCF11-204ENST00000530660 ASB9Q96DX5 294 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 BEGAINQ9BUH8 593 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 TMEM216Q9P0N5 145 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 GMPR2Q9P2T1 348 aaKnown RBP14.38□□□□□ -0.11
PCF11-204ENST00000530660 IP6K2Q9UHH9 426 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 BOLA1Q9Y3E2 137 aa14.38□□□□□ -0.11
PCF11-204ENST00000530660 ARIH1Q9Y4X5 557 aaPredicted RBP14.38□□□□□ -0.11
PCF11-204ENST00000530660 SNPHO15079 494 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 HSPA4LO95757 839 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 ALDOAP04075 364 aaKnown RBP14.37□□□□□ -0.11
PCF11-204ENST00000530660 PRKCGP05129 697 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 PRKCHP24723 683 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 ANO4Q32M45 955 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 SNAP47Q5SQN1 464 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 UNC5AQ6ZN44 842 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.37□□□□□ -0.11
PCF11-204ENST00000530660 ELMOD2Q8IZ81 293 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 SGCDQ92629 289 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 FAM96AQ9H5X1 160 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 PNPLA8Q9NP80 782 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 CYP26B1Q9NR63 512 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 MTRRQ9UBK8 725 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 PCDHGC3Q9UN70 934 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 WDR64B1ANS9 1081 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 E7ENX8 843 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 TRIM38O00635 465 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 TPP1O14773 563 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 VDRP11473 427 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 MAGP20916 626 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 ADORA2AP29274 412 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 SHMT1P34896 483 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 UBXN2AP68543 259 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 DLG2Q15700 870 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 CDONQ4KMG0 1287 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 PAGE2BQ5JRK9 111 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 EPHX4Q8IUS5 362 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 ZCCHC7Q8N3Z6 543 aaKnown RBP14.37□□□□□ -0.11
PCF11-204ENST00000530660 MINDY2Q8NBR6 621 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 FBXL13Q8NEE6 735 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 LRRN4Q8WUT4 740 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 SH2D3AQ9BRG2 576 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 WDR18Q9BV38 432 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 RAB6BQ9NRW1 208 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.37□□□□□ -0.119e-23■□□□□ 9.2
PCF11-204ENST00000530660 WARS2Q9UGM6 360 aaKnown RBP14.37□□□□□ -0.11
PCF11-204ENST00000530660 ZHX2Q9Y6X8 837 aa14.37□□□□□ -0.11
PCF11-204ENST00000530660 RNF103-CHMP3A0A140T963 221 aa14.36□□□□□ -0.11
PCF11-204ENST00000530660 GPR25O00155 361 aa14.36□□□□□ -0.11
PCF11-204ENST00000530660 HARS2P49590 506 aaKnown RBP14.36□□□□□ -0.11
PCF11-204ENST00000530660 NOMO3P69849 1222 aa14.36□□□□□ -0.11
PCF11-204ENST00000530660 TAF5Q15542 800 aa14.36□□□□□ -0.11
PCF11-204ENST00000530660 TJAP1Q5JTD0 557 aa14.36□□□□□ -0.11
PCF11-204ENST00000530660 CYP4A22Q5TCH4 519 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms