RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 DNPEPQ9ULA0 475 aa12.43□□□□□ -0.42
TRAF3IP2-211ENST00000528599 VPS13AQ96RL7 3174 aa12.43□□□□□ -0.42
TRAF3IP2-211ENST00000528599 KIAA1549LQ6ZVL6 1849 aa12.43□□□□□ -0.42
TRAF3IP2-211ENST00000528599 FAM86C2PA6NEL3 165 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 SHISA7A6NL88 538 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 EFCAB8A8MWE9 144 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 J3KR12 359 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 KDELR3O43731 214 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 LIASO43766 372 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 SNAP91O60641 907 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 MAFKO60675 156 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ZMPSTE24O75844 475 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 RBP3P10745 1247 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 MX2P20592 715 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 GALK1P51570 392 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 XRCC4Q13426 336 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 SNX1Q13596 522 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PDK1Q15118 436 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CCNG2Q16589 344 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 SLC44A4Q53GD3 710 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 LEKR1Q6ZMV7 388 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 BZW1Q7L1Q6 419 aaKnown RBP12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 RALGPS2Q86X27 583 aaPredicted RBP12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ZNF354CQ86Y25 554 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ATPAF2Q8N5M1 289 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 DCAF4L2Q8NA75 395 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CCNYQ8ND76 341 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 EDAQ92838 391 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 HDAC11Q96DB2 347 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 TSGA13Q96PP4 275 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PNKPQ96T60 521 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 C8orf33Q9H7E9 229 aaPredicted RBP12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 IPO11Q9UI26 975 aaKnown RBP12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 VPS51Q9UID3 782 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 MIA3Q5JRA6 1907 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PRRT4C9JH25 899 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 H7C0C1 242 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CBX4O00257 560 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 MCF2LO15068 1137 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 NCAM2O15394 837 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PRAMEF11O60813 436 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 VAV1P15498 845 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ETFBP38117 255 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CTSOP43234 321 aaPredicted RBP12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ATP5OP48047 213 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ARF5P84085 180 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PPIDQ08752 370 aaKnown RBP12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PRKD1Q15139 912 aaPredicted RBP12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 OASLQ15646 514 aaKnown RBP12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CYP1B1Q16678 543 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 FAM182AQ5T1J6 154 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 MBLAC2Q68D91 279 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 TTC27Q6P3X3 843 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ZNF572Q7Z3I7 529 aaPredicted RBP12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 LRRC49Q8IUZ0 686 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 AHI1Q8N157 1196 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 TERB1Q8NA31 727 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 NKD2Q969F2 451 aaPredicted RBP12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 QKIQ96PU8 341 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 P2RY13Q9BPV8 354 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 FRMD8P1Q9BZ68 369 aaPredicted RBP12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PDFQ9HBH1 243 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ACTL7AQ9Y615 435 aa12.42□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ANTXRLA6NF34 631 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 HACD1B0YJ81 288 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PPP1R12AO14974 1030 aaPredicted RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 RRP9O43818 475 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 KAT7O95251 611 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CD160O95971 181 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PEX11BO96011 259 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PDGFBP01127 241 aaPredicted RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 ALADP13716 330 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 GLULP15104 373 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 CCNCP24863 283 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 KCNJ1P48048 391 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 AP1B1Q10567 949 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 BYSLQ13895 437 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 DMC1Q14565 340 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 SLC45A4Q5BKX6 768 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 DRICH1Q6PGQ1 229 aaPredicted RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 DARS2Q6PI48 645 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 LINGO4Q6UY18 593 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 C12orf50Q8NA57 414 aaPredicted RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 SPATA4Q8NEY3 305 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 WFIKKN2Q8TEU8 576 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 TFB1MQ8WVM0 346 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 SORCS1Q8WY21 1168 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 EZH1Q92800 747 aaPredicted RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 MAGOHBQ96A72 148 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 TTC17Q96AE7 1141 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 C2orf49Q9BVC5 232 aaPredicted RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 BRD8Q9H0E9 1235 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 HOMER3Q9NSC5 361 aa12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 RBM12Q9NTZ6 932 aaKnown RBP12.41□□□□□ -0.42
TRAF3IP2-211ENST00000528599 A0A0A0MRY4 1105 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 GOLGA6L10A0A0M3HER8 536 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 BCLAF3A2AJT9 711 aaKnown RBP12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 TBC1D3BA6NDS4 549 aa12.4□□□□□ -0.42
TRAF3IP2-211ENST00000528599 PHF2O75151 1096 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms