RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 FAM107BQ9H098 131 aa7.89□□□□□ -1.15
SOX6-211ENST00000528429 RABEP2Q9H5N1 569 aa7.89□□□□□ -1.15
SOX6-211ENST00000528429 PLSCR2Q9NRY7 297 aa7.89□□□□□ -1.15
SOX6-211ENST00000528429 OLA1Q9NTK5 396 aaKnown RBP7.89□□□□□ -1.15
SOX6-211ENST00000528429 NDFIP2Q9NV92 336 aa7.89□□□□□ -1.15
SOX6-211ENST00000528429 IL37Q9NZH6 218 aa7.89□□□□□ -1.15
SOX6-211ENST00000528429 MAD1L1Q9Y6D9 718 aa7.89□□□□□ -1.15
SOX6-211ENST00000528429 MYO18AQ92614 2054 aaKnown RBP7.89□□□□□ -1.15
SOX6-211ENST00000528429 MYO16Q9Y6X6 1858 aa7.89□□□□□ -1.15
SOX6-211ENST00000528429 SCAMP3O14828 347 aaKnown RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 LSM1O15116 133 aaKnown RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 OPHN1O60890 802 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 FGF18O76093 207 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 BAIAP3O94812 1187 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 GJB5O95377 273 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 EFEMP2O95967 443 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 CCDC159P0C7I6 412 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 MX2P20592 715 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 GARSP41250 739 aaKnown RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 IRAK1P51617 712 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 KCNQ1P51787 676 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 HSD17B7P56937 341 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 FPGSQ05932 587 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 TWF1Q12792 350 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 AUHQ13825 339 aaKnown RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 VEPH1Q14D04 833 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 TRIP4Q15650 581 aaPredicted RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 AGBL2Q5U5Z8 902 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 PPP1R21Q6ZMI0 780 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 ARHGAP36Q6ZRI8 547 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 C3orf62Q6ZUJ4 267 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 CIR1Q86X95 450 aaPredicted RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 IGDCC3Q8IVU1 814 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 WDR75Q8IWA0 830 aaKnown RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 FIBCD1Q8N539 461 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 ANKRD49Q8WVL7 239 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 MCOLN1Q9GZU1 580 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 CATSPERBQ9H7T0 1116 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 SLC12A6Q9UHW9 1150 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 NUP205Q92621 2012 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 RASA4BC9J798 803 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 NCAM2O15394 837 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 TEX28O15482 410 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 JCHAINP01591 159 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 IRF1P10914 325 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 PPM1AP35813 382 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 ZNF135P52742 658 aaPredicted RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 CSE1LP55060 971 aaKnown RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 MLLT6P55198 1093 aaPredicted RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 GUCY1A3Q02108 690 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 PPIDQ08752 370 aaKnown RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 PPIGQ13427 754 aaKnown RBP eCLIP7.88□□□□□ -1.15
SOX6-211ENST00000528429 SPARCL1Q14515 664 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 EFTUD2Q15029 972 aaKnown RBP eCLIP7.88□□□□□ -1.15
SOX6-211ENST00000528429 TMED2Q15363 201 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 TPGS2Q68CL5 300 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 CASC4Q6P4E1 433 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 TMC7Q7Z402 723 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 DDX53Q86TM3 631 aaKnown RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 CHSY1Q86X52 802 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 ATPAF2Q8N5M1 289 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 ATP6V0D2Q8N8Y2 350 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 SLC39A13Q96H72 371 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 RPRD1AQ96P16 312 aaPredicted RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 WDR83Q9BRX9 315 aaKnown RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 HERC2P3Q9BVR0 1158 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 UBE2OQ9C0C9 1292 aaKnown RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 ACAD8Q9UKU7 415 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 NEU3Q9UQ49 428 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 ZNF638Q14966 1978 aaKnown RBP7.88□□□□□ -1.15
SOX6-211ENST00000528429 COL4A6Q14031 1691 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 CLUHO75153 1309 aa7.88□□□□□ -1.15
SOX6-211ENST00000528429 MYO7AQ13402 2215 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 ENO4A6NNW6 628 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 FGF10O15520 208 aaPredicted RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 USP12O75317 370 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 ABLIM3O94929 683 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 CSH1P0DML2 217 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 CSH2P0DML3 217 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 PTPN3P26045 913 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 ATP5C1P36542 298 aaKnown RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 GPX6P59796 221 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 CRADDP78560 199 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 GALNT2Q10471 571 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 ZBTB17Q13105 803 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 OLIG2Q13516 323 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 STAT4Q14765 748 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 RASA2Q15283 850 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 SMAD1Q15797 465 aaKnown RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 MS4A13Q5J8X5 152 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 C4orf22Q6V702 233 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 FBF1Q8TES7 1133 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 HDAC11Q96DB2 347 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 PGM2Q96G03 612 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 BTN2A3PQ96KV6 586 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 TRIM56Q9BRZ2 755 aaKnown RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 ROPN1BQ9BZX4 212 aaPredicted RBP7.87□□□□□ -1.15
SOX6-211ENST00000528429 TRIM4Q9C037 500 aa7.87□□□□□ -1.15
SOX6-211ENST00000528429 ROPN1Q9HAT0 212 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms