RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 NEU3Q9UQ49 428 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 CFAP46Q8IYW2 2715 aa11.89□□□□□ -0.51
CCDC90B-210ENST00000528149 E9PAM4 449 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 DCLK1O15075 740 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 CREB3O43889 395 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 SRGAP2O75044 1071 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 CYBBP04839 570 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 CISD3P0C7P0 127 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 RARAP10276 462 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 TIE1P35590 1138 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 SEMA3BQ13214 749 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 MTA1Q13330 715 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 ELF2Q15723 593 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 IFI16Q16666 785 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 HADHQ16836 314 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 PPP6R3Q5H9R7 873 aaPredicted RBP11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 ZFYVE27Q5T4F4 411 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 MANEALQ5VSG8 457 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 TMEM215Q68D42 235 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 ZNF662Q6ZS27 426 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 REXO1L1PQ8IX06 675 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 C17orf53Q8N3J3 647 aaPredicted RBP11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 ALLCQ8N6M5 410 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 TEKT4Q8WW24 435 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 TMA16Q96EY4 203 aaKnown RBP11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 SLC6A17Q9H1V8 727 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 CD93Q9NPY3 652 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 ARHGEF4Q9NR80 690 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 MPP6Q9NZW5 540 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 MARK1Q9P0L2 795 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 OR12D3Q9UGF7 316 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 ALG6Q9Y672 507 aa11.88□□□□□ -0.51
CCDC90B-210ENST00000528149 TYW5A2RUC4 315 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 PATE3B3GLJ2 98 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 WASH3PC4AMC7 463 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 SGK1O00141 431 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 ZSCAN12O43309 604 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 CACNG3O60359 315 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 ADAM23O75077 832 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 LRIG2O94898 1065 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 KAT7O95251 611 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 PENKP01210 267 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 KRT1P04264 644 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 PRB1P04280 392 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 SLC1A1P43005 524 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 KIR2DL1P43626 348 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 AIF1P55008 147 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 TPI1P60174 286 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 SIM1P81133 766 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 NRG1Q02297 640 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 GAD2Q05329 585 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 GRSF1Q12849 480 aaKnown RBP eCLIP11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 NR1H3Q13133 447 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 KRT81Q14533 505 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 MPPE1Q53F39 396 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 ALFQ53S48 1182 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 RABGAP1LQ5R372 815 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 RWDD4Q6NW29 188 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 TMEM92Q6UXU6 159 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 TFAP2DQ7Z6R9 452 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 CCAR2Q8N163 923 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 SYNPOQ8N3V7 929 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 OR52K2Q8NGK3 314 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 USP33Q8TEY7 942 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 HNRNPLLQ8WVV9 542 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 KRT35Q92764 455 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 TBC1D31Q96DN5 1066 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 LRIG1Q96JA1 1093 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 EPAS1Q99814 870 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 IRX2Q9BZI1 471 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 OSBPL2Q9H1P3 480 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 PACSIN2Q9UNF0 486 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 INVSQ9Y283 1065 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 RAD54BQ9Y620 910 aa11.87□□□□□ -0.51
CCDC90B-210ENST00000528149 SPTA1P02549 2419 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 IGLV3-10A0A075B6K4 115 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 A0A1B0GVM2 712 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 FAM221BA6H8Z2 402 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 TCAF2A6NFQ2 919 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 EEF2KO00418 725 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 KHNYNO15037 678 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 PSTPIP1O43586 416 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 CNTN5O94779 1100 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 RHOBTB1O94844 696 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 LUC7L3O95232 432 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 KLF8O95600 359 aaPredicted RBP11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 KRT7P08729 469 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 CD48P09326 243 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 GOT1P17174 413 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 L1CAMP32004 1257 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 DNA2P51530 1060 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 CDH6P55285 790 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 MMRN1Q13201 1228 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 DPYSL2Q16555 572 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 BOLA3Q53S33 107 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 FSCBQ5H9T9 825 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 TTC39BQ5VTQ0 682 aaPredicted RBP11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 LRRC31Q6UY01 552 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 PEX26Q7Z412 305 aa11.86□□□□□ -0.51
CCDC90B-210ENST00000528149 POLNQ7Z5Q5 900 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms