RNA–Protein interactions for RNA: ENST00000526357.5

CTNND1-213, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-213ENST00000526357 RAB25P57735 213 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 GMFBP60983 142 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 SEZ6Q53EL9 994 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 GPAT3Q53EU6 434 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 ARMC12Q5T9G4 340 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 IRGCQ6NXR0 463 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 CYP2R1Q6VVX0 501 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 CAVIN3Q969G5 261 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 VPS35Q96QK1 796 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 DCLK3Q9C098 648 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 SEMA6AQ9H2E6 1030 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 PTPRHQ9HD43 1115 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 SAR1AQ9NR31 198 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 RASSF1Q9NS23 344 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 IKZF3Q9UKT9 509 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 PCDHGA3Q9Y5H0 932 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 A0A096LPK6 155 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 LDOC1O95751 146 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 CHRNGP07510 517 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 MGAT1P26572 445 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 ADSSP30520 456 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 SLC26A2P50443 739 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 HUNKP57058 714 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 PTPN11Q06124 597 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 GRB14Q14449 540 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 SWI5Q1ZZU3 235 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 SNX32Q86XE0 403 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 IQCF2Q8IXL9 164 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 HTR3CQ8WXA8 447 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 ATL1Q8WXF7 558 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 POP5Q969H6 163 aaKnown RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 REXO5Q96IC2 774 aaKnown RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 CRISPLD1Q9H336 500 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 ARL15Q9NXU5 204 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 TMA7Q9Y2S6 64 aaKnown RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 CNTNAP5Q8WYK1 1306 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 UGGT1Q9NYU2 1555 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 SPTLC1O15269 473 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 RBMXL2O75526 392 aaKnown RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 NFKB1P19838 968 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 KLRC2P26717 231 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 RPS6KA3P51812 740 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 ZNF135P52742 658 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 UGT2B15P54855 530 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 C1QBPQ07021 282 aaKnown RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 NOL9Q5SY16 702 aaKnown RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 TMC7Q7Z402 723 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 OFCC1Q8IZS5 231 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 SMARCD1Q96GM5 515 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 COX4I2Q96KJ9 171 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 MYOZ2Q9NPC6 264 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 CATSPERZQ9NTU4 200 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 VPS4AQ9UN37 437 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.56□□□□□ -0.883e-9■□□□□ 10.4
CTNND1-213ENST00000526357 MRPS7Q9Y2R9 242 aaKnown RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 TTC37Q6PGP7 1564 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 PSMD11O00231 422 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 TRDMT1O14717 391 aaKnown RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 RIPK2O43353 540 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 PGK1P00558 417 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 CLUP10909 449 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 TPH1P17752 444 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 LRPAP1P30533 357 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 VBP1P61758 197 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 CDK16Q00536 496 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 NFIXQ14938 502 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 ZNF470Q6ECI4 717 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 ZNF549Q6P9A3 640 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 HPS6Q86YV9 775 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 BHLHE22Q8NFJ8 381 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 CXorf40AQ8TE69 158 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 ATG4CQ96DT6 458 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 GPN1Q9HCN4 374 aaPredicted RBP9.56□□□□□ -0.88
CTNND1-213ENST00000526357 GNPTGQ9UJJ9 305 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 GMPPBQ9Y5P6 360 aa9.56□□□□□ -0.88
CTNND1-213ENST00000526357 IQCMA0A1B0GVH7 501 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 NDUFS2O75306 463 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 TCEA3O75764 348 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 TSPAN9O75954 239 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 PGM3O95394 542 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 H2AFXP16104 143 aaPredicted RBP9.55□□□□□ -0.88
CTNND1-213ENST00000526357 AMD1P17707 334 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 USP46P62068 366 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 KYAT3Q6YP21 454 aaKnown RBP9.55□□□□□ -0.88
CTNND1-213ENST00000526357 PAGE2Q7Z2X7 111 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 OAFQ86UD1 273 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 HIPK1Q86Z02 1210 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 ZC3H7AQ8IWR0 971 aaKnown RBP9.55□□□□□ -0.88
CTNND1-213ENST00000526357 NELL1Q92832 810 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 CELF6Q96J87 481 aaKnown RBP9.55□□□□□ -0.88
CTNND1-213ENST00000526357 SYT15Q9BQS2 421 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 SPON1Q9HCB6 807 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 CISHQ9NSE2 258 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 OR10H1Q9Y4A9 318 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 MAGI2Q86UL8 1455 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 TEX46H3BTG2 121 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 SLC28A1O00337 649 aa9.55□□□□□ -0.88
CTNND1-213ENST00000526357 OPLAHO14841 1288 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms