RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 SH2D3CQ8N5H7 860 aa19.03■□□□□ 0.64
CAPN1-203ENST00000525013 ATP11CQ8NB49 1132 aa19.03■□□□□ 0.64
CAPN1-203ENST00000525013 SPON2Q9BUD6 331 aa19.03■□□□□ 0.64
CAPN1-203ENST00000525013 SELENOOQ9BVL4 669 aa19.03■□□□□ 0.64
CAPN1-203ENST00000525013 GAREM1Q9H706 876 aa19.03■□□□□ 0.64
CAPN1-203ENST00000525013 ADAMTS1Q9UHI8 967 aa19.03■□□□□ 0.64
CAPN1-203ENST00000525013 VPS51Q9UID3 782 aa19.03■□□□□ 0.64
CAPN1-203ENST00000525013 DOCK9Q9BZ29 2069 aa19.03■□□□□ 0.64
CAPN1-203ENST00000525013 CACNA1BQ00975 2339 aa19.03■□□□□ 0.64
CAPN1-203ENST00000525013 A0A0D9SEW6 157 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 SPAARA0A1B0GVQ0 90 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 GJB3O75712 270 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 MT-CO1P00395 513 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 IGHV4-34P06331 123 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 FERP16591 822 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 ADRA1BP35368 520 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 ZNF165P49910 485 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 SIM1P81133 766 aaPredicted RBP19.02■□□□□ 0.64
CAPN1-203ENST00000525013 BNC1Q01954 994 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 HLA-BQ31612 363 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 POM121L1PQ3SYA9 428 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 FILIP1LQ4L180 1135 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 FAM46CQ5VWP2 391 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 LAYNQ6UX15 382 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.02■□□□□ 0.64
CAPN1-203ENST00000525013 ADAT2Q7Z6V5 191 aaKnown RBP19.02■□□□□ 0.64
CAPN1-203ENST00000525013 OR2T34Q8NGX1 318 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 PSMB7Q99436 277 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 ZYG11BQ9C0D3 744 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 IL21RQ9HBE5 538 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 RTN4Q9NQC3 1192 aaKnown RBP19.02■□□□□ 0.64
CAPN1-203ENST00000525013 OR12D3Q9UGF7 316 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 HS3ST2Q9Y278 367 aa19.02■□□□□ 0.64
CAPN1-203ENST00000525013 TP53BP1Q12888 1972 aaPredicted RBP19.02■□□□□ 0.64
CAPN1-203ENST00000525013 CBX4O00257 560 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 PLK4O00444 970 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 SH3BP5O60239 455 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 SRCP12931 536 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 RRM1P23921 792 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 RFC1P35251 1148 aaPredicted RBP19.01■□□□□ 0.63
CAPN1-203ENST00000525013 PTPN9P43378 593 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 METAP1P53582 386 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 ADPRHP54922 357 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 KIF19Q2TAC6 998 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 RWDD4Q6NW29 188 aaKnown RBP19.01■□□□□ 0.63
CAPN1-203ENST00000525013 DNAJC24Q6P3W2 148 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 LINGO4Q6UY18 593 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 DRC7Q8IY82 874 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 C3orf20Q8ND61 904 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 OR7D4Q8NG98 312 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 FAM172AQ8WUF8 416 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 CAMK1GQ96NX5 476 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 OSGEPQ9NPF4 335 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 SARDHQ9UL12 918 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 ANKRD6Q9Y2G4 727 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 FARP1Q9Y4F1 1045 aaPredicted RBP19.01■□□□□ 0.63
CAPN1-203ENST00000525013 PCDHB9Q9Y5E1 797 aa19.01■□□□□ 0.63
CAPN1-203ENST00000525013 TBC1D3DA0A087WVF3 549 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 TBC1D3IA0A087WXS9 549 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 TBC1D3EA0A087X179 549 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 TBC1D3KA0A087X1G2 549 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 ILVBLA1L0T0 632 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 ANKRD62A6NC57 917 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 TBC1D3FA6NER0 549 aaPredicted RBP19■□□□□ 0.63
CAPN1-203ENST00000525013 TBC1D3LB9A6J9 549 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 C1QTNF3-AMACRE9PGA6 284 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 K7ERQ8 282 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 MCF2LO15068 1137 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 TBC1D3HP0C7X1 549 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 GPD1P21695 349 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 GRIA4P48058 902 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 SHC2P98077 582 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 C1QBPQ07021 282 aaKnown RBP19■□□□□ 0.63
CAPN1-203ENST00000525013 TBC1D3GQ6DHY5 549 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 TBC1D3CQ6IPX1 549 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 WDR59Q6PJI9 974 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 MON1BQ7L1V2 547 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 STRADAQ7RTN6 431 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 NAXDQ8IW45 347 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 TBC1D3Q8IZP1 549 aaPredicted RBP19■□□□□ 0.63
CAPN1-203ENST00000525013 DCAF4L2Q8NA75 395 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 PIP4K2CQ8TBX8 421 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 SETD7Q8WTS6 366 aaKnown RBP19■□□□□ 0.63
CAPN1-203ENST00000525013 CCDC114Q96M63 670 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 TM7SF3Q9NS93 570 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 PPARGC1AQ9UBK2 798 aaKnown RBP19■□□□□ 0.63
CAPN1-203ENST00000525013 PPM1HQ9ULR3 514 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 FNDC3AQ9Y2H6 1198 aaKnown RBP19■□□□□ 0.63
CAPN1-203ENST00000525013 SNX11Q9Y5W9 270 aa19■□□□□ 0.63
CAPN1-203ENST00000525013 A0A1W2PPC4 97 aa18.99■□□□□ 0.63
CAPN1-203ENST00000525013 SIGLEC16A6NMB1 481 aa18.99■□□□□ 0.63
CAPN1-203ENST00000525013 ALOX15BO15296 676 aa18.99■□□□□ 0.63
CAPN1-203ENST00000525013 SMAD6O43541 496 aaKnown RBP18.99■□□□□ 0.63
CAPN1-203ENST00000525013 RTN2O75298 545 aa18.99■□□□□ 0.63
CAPN1-203ENST00000525013 TNFAIP3P21580 790 aa18.99■□□□□ 0.63
CAPN1-203ENST00000525013 GLDCP23378 1020 aa18.99■□□□□ 0.63
CAPN1-203ENST00000525013 DRD3P35462 400 aa18.99■□□□□ 0.63
CAPN1-203ENST00000525013 CCR5P51681 352 aa18.99■□□□□ 0.63
CAPN1-203ENST00000525013 HDAC4P56524 1084 aa18.99■□□□□ 0.63
CAPN1-203ENST00000525013 GSCP56915 257 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms