RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 TIAL1Q01085 375 aaKnown RBP eCLIP3.38□□□□□ -1.87
CSDE1-208ENST00000524652 MCL1Q07820 350 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 PTCHD3Q3KNS1 767 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 KLHL22Q53GT1 634 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 DCAF12L1Q5VU92 463 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 ANO7Q6IWH7 933 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 TMEM65Q6PI78 240 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 CERS3Q8IU89 383 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 LIX1LQ8IVB5 337 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 FOXP4Q8IVH2 680 aaPredicted RBP3.38□□□□□ -1.87
CSDE1-208ENST00000524652 MB21D2Q8IYB1 491 aaPredicted RBP3.38□□□□□ -1.87
CSDE1-208ENST00000524652 SCYL3Q8IZE3 742 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 IL31RAQ8NI17 732 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 ACER1Q8TDN7 264 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 NSMCE1Q8WV22 266 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 RUFY2Q8WXA3 655 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 MAML1Q92585 1016 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 SPSB4Q96A44 273 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 TCEANC2Q96MN5 208 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 SIGLEC11Q96RL6 698 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 ADGRE3Q9BY15 652 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 LRRC2Q9BYS8 371 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 DNMT3BQ9UBC3 853 aaKnown RBP3.38□□□□□ -1.87
CSDE1-208ENST00000524652 HERC5Q9UII4 1024 aaKnown RBP3.38□□□□□ -1.87
CSDE1-208ENST00000524652 MAFFQ9ULX9 164 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 EYSQ5T1H1 3165 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 RANBP2P49792 3224 aaKnown RBP3.38□□□□□ -1.87
CSDE1-208ENST00000524652 MAST4O15021 2626 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 ZMYM2Q9UBW7 1377 aa3.38□□□□□ -1.87
CSDE1-208ENST00000524652 ATRXP46100 2492 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 TTC28Q96AY4 2481 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 LOC102723971A0A1B0GUV8 181 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 TMEM233B4DJY2 109 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 ADAM10O14672 748 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 CD3EAPO15446 510 aaKnown RBP3.37□□□□□ -1.87
CSDE1-208ENST00000524652 RANBP6O60518 1105 aaKnown RBP3.37□□□□□ -1.87
CSDE1-208ENST00000524652 SRGAP2O75044 1071 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 CNOT3O75175 753 aaKnown RBP3.37□□□□□ -1.87
CSDE1-208ENST00000524652 LARGE1O95461 756 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 EEF2P13639 858 aaKnown RBP3.37□□□□□ -1.87
CSDE1-208ENST00000524652 SCP2P22307 547 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 KLRC1P26715 233 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 HOXD9P28356 352 aaPredicted RBP3.37□□□□□ -1.87
CSDE1-208ENST00000524652 UQCRC1P31930 480 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 LBX1P52954 281 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 COPB1P53618 953 aaKnown RBP3.37□□□□□ -1.87
CSDE1-208ENST00000524652 HUNKP57058 714 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 TIRAPP58753 221 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 LINC00205P59089 165 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 TFAP4Q01664 338 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 ID2Q02363 134 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 CFHR1Q03591 330 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 IMMTQ16891 758 aaKnown RBP3.37□□□□□ -1.87
CSDE1-208ENST00000524652 TRIM71Q2Q1W2 868 aaKnown RBP3.37□□□□□ -1.87
CSDE1-208ENST00000524652 VSTM1Q6UX27 236 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 DCDC5Q6ZRR9 648 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 MFSD6Q6ZSS7 791 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 MAEAQ7L5Y9 396 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 PIP4P1Q86T03 277 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 ANKRD13AQ8IZ07 590 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 MAFAQ8NHW3 353 aaPredicted RBP3.37□□□□□ -1.87
CSDE1-208ENST00000524652 PPP1R35Q8TAP8 253 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 DNAJB14Q8TBM8 379 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 JPH3Q8WXH2 748 aaPredicted RBP3.37□□□□□ -1.87
CSDE1-208ENST00000524652 WASF1Q92558 559 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 OPTNQ96CV9 577 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 HS6ST2Q96MM7 605 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 TTC14Q96N46 770 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 NACAP1Q9BZK3 213 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 ATP6V0A4Q9HBG4 840 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 SWAP70Q9UH65 585 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 ZNF180Q9UJW8 692 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 ZNF580Q9UK33 172 aa3.37□□□□□ -1.87
CSDE1-208ENST00000524652 BDP1A6H8Y1 2624 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 ZNF236Q9UL36 1845 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 TRIM43BA6NCK2 446 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 FAM227AF5H4B4 570 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 MPHOSPH10O00566 681 aaKnown RBP3.36□□□□□ -1.87
CSDE1-208ENST00000524652 SH2B2O14492 632 aaPredicted RBP3.36□□□□□ -1.87
CSDE1-208ENST00000524652 TBX3O15119 743 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 EPB41L2O43491 1005 aaKnown RBP3.36□□□□□ -1.87
CSDE1-208ENST00000524652 AKAP10O43572 662 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 SPRY2O43597 315 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 PRC1O43663 620 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 TLR2O60603 784 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 CTNND1O60716 968 aaKnown RBP3.36□□□□□ -1.87
CSDE1-208ENST00000524652 RFPL1O75677 317 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 TUSC2O75896 110 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 REC8O95072 547 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 ASNSP08243 561 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 TSPY3P0CV98 308 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 TSPY8P0CW00 308 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 CREB1P16220 341 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 RXRAP19793 462 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 CASTP20810 708 aaKnown RBP3.36□□□□□ -1.87
CSDE1-208ENST00000524652 RPS6KB1P23443 525 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 SLC7A1P30825 629 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 CCKARP32238 428 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 HMGCS2P54868 508 aa3.36□□□□□ -1.87
CSDE1-208ENST00000524652 RPS13P62277 151 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms