RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	RPAIN	Q86UA6	219 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	GATAD2A	Q86YP4	633 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	ERC1	Q8IUD2	1116 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	DCBLD1	Q8N8Z6	715 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	KCNH5	Q8NCM2	988 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	IFI44	Q8TCB0	444 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	STON2	Q8WXE9	905 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	PIGB	Q92521	554 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	RNF125	Q96EQ8	232 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	HIC2	Q96JB3	615 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	MYOC	Q99972	504 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	TMEM79	Q9BSE2	394 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	TWSG1	Q9GZX9	223 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	USP44	Q9H0E7	712 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	OR10A4	Q9H209	315 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	ABHD16B	Q9H3Z7	469 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	TAF1D	Q9H5J8	278 aa	Predicted RBP	4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	BRF2	Q9HAW0	419 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	DIAPH3	Q9NSV4	1193 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	TBC1D23	Q9NUY8	699 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	MDFIC	Q9P1T7	246 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	PA2G4	Q9UQ80	394 aa	Known RBP	4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	CYP46A1	Q9Y6A2	500 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	NHS	Q6T4R5	1651 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	ANKRD36B	Q8N2N9	1353 aa		4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.63	□□□□□ -1.67
PCM1-223	ENST00000524356	KCP	Q6ZWJ8	1503 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	PI4K2B	G5E9Z4	385 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	UBE2C	O00762	179 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	TUBB4A	P04350	444 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	PRKCB	P05771	671 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	FCER1A	P12319	257 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	NPPB	P16860	134 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	CHRNA5	P30532	468 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	ATP6V1E1	P36543	226 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	RGS2	P41220	211 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	CTCF	P49711	727 aa	Predicted RBP	4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	LBX1	P52954	281 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	AP2B1	P63010	937 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	TMF1	P82094	1093 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	MC1R	Q01726	317 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	PPARD	Q03181	441 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	CALD1	Q05682	793 aa	Known RBP	4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	EXOSC9	Q06265	439 aa	Known RBP	4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	SLC13A2	Q13183	592 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	FLYWCH1	Q4VC44	716 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	ARL6IP4	Q66PJ3	421 aa	Known RBP	4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	ATG16L1	Q676U5	607 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	OTUD7B	Q6GQQ9	843 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	CPLX2	Q6PUV4	134 aa	Known RBP	4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	ZNF783	Q6ZMS7	281 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	RRAGA	Q7L523	313 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	PXK	Q7Z7A4	578 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	FAM90A1	Q86YD7	464 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	CEP97	Q8IW35	865 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	CCDC117	Q8IWD4	279 aa	Predicted RBP	4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	GALNT4	Q8N4A0	578 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	TEX9	Q8N6V9	391 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	AVL9	Q8NBF6	648 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	OR6B3	Q8NGW1	331 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	ZFPM2	Q8WW38	1151 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	IP6K1	Q92551	441 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.62	□□□□□ -1.67	7e-8	■■□□□ 13
PCM1-223	ENST00000524356	ABHD8	Q96I13	439 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	TMX3	Q96JJ7	454 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	SPATA17	Q96L03	361 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	NCAPG	Q9BPX3	1015 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	REEP2	Q9BRK0	252 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	RTKN	Q9BST9	563 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	C1orf43	Q9BWL3	253 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	MAGEB5	Q9BZ81	275 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	CHST8	Q9H2A9	424 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	MRPL46	Q9H2W6	279 aa	Known RBP	4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	WDCP	Q9H6R7	721 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	TRPV4	Q9HBA0	871 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	MOCS1	Q9NZB8	636 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	SEL1L	Q9UBV2	794 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	ZNF212	Q9UDV6	495 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	MAFF	Q9ULX9	164 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	MED16	Q9Y2X0	877 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	RRP7A	Q9Y3A4	280 aa	Known RBP	4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	PIAS3	Q9Y6X2	628 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	PXDNL	A1KZ92	1463 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	NFAT5	O94916	1531 aa		4.62	□□□□□ -1.67
PCM1-223	ENST00000524356	TOPAZ1	Q8N9V7	1692 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	WDR90	Q96KV7	1748 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	PRAMEF33	A0A0G2JMD5	474 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	TRIM64C	A6NLI5	447 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	TMEM233	B4DJY2	109 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356		H0Y626	953 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	GTPBP1	O00178	669 aa	Known RBP	4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	BTN3A1	O00481	513 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	PCDH17	O14917	1159 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	AKR1B10	O60218	316 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	PRAMEF10	O60809	474 aa		4.61	□□□□□ -1.67
PCM1-223	ENST00000524356	USP1	O94782	785 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms