RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 PRPSAP2O60256 369 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 GOT1P17174 413 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 EPHB2P29323 1055 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 STARD3Q14849 445 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 DLG2Q15700 870 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 ATP13A4Q4VNC1 1196 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 USP39Q53GS9 565 aaKnown RBP12.24□□□□□ -0.45
CLN8-207ENST00000524258 KCNT1Q5JUK3 1230 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 SPAG17Q6Q759 2223 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 POLNQ7Z5Q5 900 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 ARHGAP12Q8IWW6 846 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 TEKT4Q8WW24 435 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 CTNNBL1Q8WYA6 563 aaPredicted RBP12.24□□□□□ -0.45
CLN8-207ENST00000524258 PPP1R9BQ96SB3 815 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 EPAS1Q99814 870 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 MUC3BQ9H195 1237 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 MAGEH1Q9H213 219 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 DHX35Q9H5Z1 703 aaKnown RBP12.24□□□□□ -0.45
CLN8-207ENST00000524258 PRDM16Q9HAZ2 1276 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 CTTNBP2NLQ9P2B4 639 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 IMPACTQ9P2X3 320 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 DNAI1Q9UI46 699 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 SALL4Q9UJQ4 1053 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 TFR2Q9UP52 801 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 PLXND1Q9Y4D7 1925 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 DMXL1Q9Y485 3027 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 LAMA1P25391 3075 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 EDDM13A0A1B0GTR0 161 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 RNF103O00237 685 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 CREB3O43889 395 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 SYNCRIPO60506 623 aaKnown RBP12.23□□□□□ -0.45
CLN8-207ENST00000524258 GFRA3O60609 400 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 ERCC2P18074 760 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 MAN1A1P33908 653 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 TPMTP51580 245 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 HADHBP55084 474 aaKnown RBP12.23□□□□□ -0.45
CLN8-207ENST00000524258 ST8SIA6P61647 398 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 LPAL2Q16609 132 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 SMTNL2Q2TAL5 461 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 PMS2CLQ68D20 193 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 LAIR1Q6GTX8 287 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 LINGO4Q6UY18 593 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 RFX8Q6ZV50 586 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.23□□□□□ -0.45
CLN8-207ENST00000524258 TMTC1Q8IUR5 882 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 TP53INP2Q8IXH6 220 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 STK40Q8N2I9 435 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 DCLK2Q8N568 766 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 RFFLQ8WZ73 363 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 FAM131CQ96AQ9 280 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 SIPA1Q96FS4 1042 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 C2orf49Q9BVC5 232 aaPredicted RBP12.23□□□□□ -0.45
CLN8-207ENST00000524258 FBRSQ9HAH7 460 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 PCDH18Q9HCL0 1135 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 PARD6AQ9NPB6 346 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 ETNK2Q9NVF9 386 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 WSB2Q9NYS7 404 aaPredicted RBP12.23□□□□□ -0.45
CLN8-207ENST00000524258 BCCIPQ9P287 314 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLN8-207ENST00000524258 MFHAS1Q9Y4C4 1052 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 PCDHA13Q9Y5I0 950 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 EPN1Q9Y6I3 576 aaPredicted RBP12.23□□□□□ -0.45
CLN8-207ENST00000524258 CEP250Q9BV73 2442 aa12.23□□□□□ -0.45
CLN8-207ENST00000524258 NUMA1Q14980 2115 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 RASA4BC9J798 803 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 FGF10O15520 208 aaPredicted RBP12.22□□□□□ -0.45
CLN8-207ENST00000524258 RASA4O43374 803 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 KDELR3O43731 214 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 RAMP2O60895 175 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 ZNF217O75362 1048 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 NDUFA10O95299 355 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 RETP07949 1114 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 CD48P09326 243 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 MAGEA1P43355 309 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 ZNF135P52742 658 aaPredicted RBP12.22□□□□□ -0.45
CLN8-207ENST00000524258 METAP1P53582 386 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 YBEYP58557 167 aaPredicted RBP12.22□□□□□ -0.45
CLN8-207ENST00000524258 TPI1P60174 286 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 KRT83P78385 493 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 ZBTB16Q05516 673 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 SLC20A2Q08357 652 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 SERINC3Q13530 473 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 PRR23BQ6ZRT6 265 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 CEP68Q76N32 757 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 RHOT2Q8IXI1 618 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 PGBD3Q8N328 593 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 NPWQ8N729 165 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 OR2A12Q8NGT7 310 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 HMCESQ96FZ2 354 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 LOXL4Q96JB6 756 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 CSPG4P5Q96PW8 444 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 SPON2Q9BUD6 331 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 ZWILCHQ9H900 591 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 ATP13A1Q9HD20 1204 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 SERGEFQ9UGK8 458 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 SARDHQ9UL12 918 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 PPM1HQ9ULR3 514 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 CYP8B1Q9UNU6 501 aa12.22□□□□□ -0.45
CLN8-207ENST00000524258 C3orf70A6NLC5 250 aaPredicted RBP12.21□□□□□ -0.45
CLN8-207ENST00000524258 CBX4O00257 560 aa12.21□□□□□ -0.45
CLN8-207ENST00000524258 EEF2KO00418 725 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms