RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ZNF776Q68DI1 518 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 IL31Q6EBC2 164 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 KIAA1324Q6UXG2 1013 aaKnown RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 RFX8Q6ZV50 586 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 ASCL5Q7RTU5 278 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 UMODL1-AS1Q8N2C9 162 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 OR7D4Q8NG98 312 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 BTBD6Q96KE9 485 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 RPL10LQ96L21 214 aaKnown RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 CCDC114Q96M63 670 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 KCTD15Q96SI1 283 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 BAG1Q99933 345 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 SPON2Q9BUD6 331 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 MAGEB5Q9BZ81 275 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 CEP44Q9C0F1 390 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 MKRN2Q9H000 416 aaKnown RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 RSPH9Q9H1X1 276 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 OSGEPQ9NPF4 335 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 ITM2CQ9NQX7 267 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 USP36Q9P275 1121 aaKnown RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 RCOR3Q9P2K3 495 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 DNAI1Q9UI46 699 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 SLCO3A1Q9UIG8 710 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 GMEB2Q9UKD1 530 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 HPCAL4Q9UM19 191 aa12.85□□□□□ -0.35
VEGFA-225ENST00000523950 EPN1Q9Y6I3 576 aaPredicted RBP12.85□□□□□ -0.35
VEGFA-225ENST00000523950 A0A0A6YYK5 440 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-225ENST00000523950 TTC34A8MYJ7 566 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 DAPK3O43293 454 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 ZMPSTE24O75844 475 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 DNTTP04053 509 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 KRT7P08729 469 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 RARAP10276 462 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 SRCP12931 536 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 SLC1A1P43005 524 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 CA9Q16790 459 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 PLK5Q496M5 336 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 TTC31Q49AM3 519 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-225ENST00000523950 PPP6R3Q5H9R7 873 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-225ENST00000523950 C9orf64Q5T6V5 341 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 PMS2CLQ68D20 193 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 POLNQ7Z5Q5 900 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 DSG4Q86SJ6 1040 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 TXLNBQ8N3L3 684 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 LZTR1Q8N653 840 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 ZNF366Q8N895 744 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 ATP11CQ8NB49 1132 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 FAM71BQ8TC56 605 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 FRS2Q8WU20 508 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 CASKIN2Q8WXE0 1202 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 RUBCNQ92622 972 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 PTPRN2Q92932 1015 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 DUSP15Q9H1R2 295 aaPredicted RBP12.84□□□□□ -0.35
VEGFA-225ENST00000523950 NDFIP2Q9NV92 336 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 GPATCH2LQ9NWQ4 482 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 PCDHGA5Q9Y5G8 931 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 PCDHA13Q9Y5I0 950 aa12.84□□□□□ -0.35
VEGFA-225ENST00000523950 IGHV1OR15-9A0A0B4J2B8 117 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 SOWAHDA6NJG2 315 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 CBX4O00257 560 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 KDELR3O43731 214 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 SNAP91O60641 907 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 LRP3O75074 770 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 ADH1BP00325 375 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 RETP07949 1114 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 GOT1P17174 413 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 ERCC2P18074 760 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 DPP6P42658 865 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 SSR1P43307 286 aaKnown RBP12.83□□□□□ -0.36
VEGFA-225ENST00000523950 SERPINH1P50454 418 aaKnown RBP12.83□□□□□ -0.36
VEGFA-225ENST00000523950 RPS14P62263 151 aaKnown RBP12.83□□□□□ -0.36
VEGFA-225ENST00000523950 ARF5P84085 180 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 CCDC173Q0VFZ6 552 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 MESDQ14696 234 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 PDK2Q15119 407 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 DLG2Q15700 870 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 SMTNL2Q2TAL5 461 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 ACCSLQ4AC99 568 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 KCNT1Q5JUK3 1230 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 DAB2IPQ5VWQ8 1189 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 USP30Q70CQ3 517 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 LPCAT2Q7L5N7 544 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 KBTBD6Q86V97 674 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 FAM160A2Q8N612 972 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-225ENST00000523950 GPR161Q8N6U8 529 aaKnown RBP12.83□□□□□ -0.36
VEGFA-225ENST00000523950 PCDH20Q8N6Y1 951 aaKnown RBP12.83□□□□□ -0.36
VEGFA-225ENST00000523950 SPC24Q8NBT2 197 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 OR8D1Q8WZ84 308 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 HSPH1Q92598 858 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 ISG20Q96AZ6 181 aaKnown RBP12.83□□□□□ -0.36
VEGFA-225ENST00000523950 LRRC19Q9H756 370 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 PCDH18Q9HCL0 1135 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 CWC15Q9P013 229 aaKnown RBP12.83□□□□□ -0.36
VEGFA-225ENST00000523950 NCDNQ9UBB6 729 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.36
VEGFA-225ENST00000523950 CEP192Q8TEP8 1941 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 THADAQ6YHU6 1953 aa12.83□□□□□ -0.36
VEGFA-225ENST00000523950 ARHGAP42A6NI28 874 aa12.82□□□□□ -0.36
VEGFA-225ENST00000523950 RASA4BC9J798 803 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms