RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 VASPP50552 380 aaPredicted RBP21.24■□□□□ 0.99
SDCBP-209ENST00000522243 RACK1P63244 317 aaKnown RBP21.24■□□□□ 0.99
SDCBP-209ENST00000522243 KRT83P78385 493 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 STX1AQ16623 288 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 CDO1Q16878 200 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 TBC1D3GQ6DHY5 549 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 TBC1D3CQ6IPX1 549 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 TBC1D3Q8IZP1 549 aaPredicted RBP21.24■□□□□ 0.99
SDCBP-209ENST00000522243 RHBDD1Q8TEB9 315 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 TMEM121BQ9BXQ6 578 aaPredicted RBP21.24■□□□□ 0.99
SDCBP-209ENST00000522243 ACACBO00763 2458 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 DOCK4Q8N1I0 1966 aa21.24■□□□□ 0.99
SDCBP-209ENST00000522243 A0A0D9SEW6 157 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 K7ERQ8 282 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 WNT9AO14904 365 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 RTN2O75298 545 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 WNT1P04628 370 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 FTH1P19P0C7X4 201 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 C21orf59P57076 290 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 PPP2CBP62714 309 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 PPP2CAP67775 309 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 IL9RQ01113 521 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 MYL5Q02045 173 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 ZNF423Q2M1K9 1284 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 C15orf59Q2T9L4 293 aaPredicted RBP21.23■□□□□ 0.99
SDCBP-209ENST00000522243 PRAMEF14Q5SWL7 426 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 LINGO4Q6UY18 593 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 BNIPLQ7Z465 357 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 DSG4Q86SJ6 1040 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 ATP11CQ8NB49 1132 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 ANKRD20A12PQ8NF67 263 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 NEK11Q8NG66 645 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 OR7D4Q8NG98 312 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 JOSD2Q8TAC2 188 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 C1orf74Q96LT6 269 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 PCDHB18PQ96TA0 734 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 ACE2Q9BYF1 805 aaPredicted RBP21.23■□□□□ 0.99
SDCBP-209ENST00000522243 AASDHPPTQ9NRN7 309 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 LIMA1Q9UHB6 759 aaKnown RBP21.23■□□□□ 0.99
SDCBP-209ENST00000522243 VPS51Q9UID3 782 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 BTBD3Q9Y2F9 522 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 NEUROG3Q9Y4Z2 214 aa21.23■□□□□ 0.99
SDCBP-209ENST00000522243 MAP1BP46821 2468 aaKnown RBP21.22■□□□□ 0.99
SDCBP-209ENST00000522243 MCF2LO15068 1137 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 TRIM16O95361 564 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 CDK11BP21127 795 aaKnown RBP21.22■□□□□ 0.99
SDCBP-209ENST00000522243 MMP8P22894 467 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 GLDCP23378 1020 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 RRM1P23921 792 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 OR1E1P30953 314 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 CTSKP43235 329 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 CCR5P51681 352 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 UBXN1Q04323 297 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 CNTN1Q12860 1018 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 ARTNQ5T4W7 220 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 DBX2Q6ZNG2 339 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 SETD3Q86TU7 594 aaPredicted RBP21.22■□□□□ 0.99
SDCBP-209ENST00000522243 SLCO6A1Q86UG4 719 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 PIP4K2CQ8TBX8 421 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 RXFP2Q8WXD0 754 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 GATA6Q92908 595 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 HAPLN3Q96S86 360 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 PPM1HQ9ULR3 514 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 HS3ST2Q9Y278 367 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 PCDHGB2Q9Y5G2 931 aa21.22■□□□□ 0.99
SDCBP-209ENST00000522243 DOCK9Q9BZ29 2069 aa21.21■□□□□ 0.99
SDCBP-209ENST00000522243 IGLV3-10A0A075B6K4 115 aa21.21■□□□□ 0.99
SDCBP-209ENST00000522243 LGALS16A8MUM7 142 aa21.21■□□□□ 0.99
SDCBP-209ENST00000522243 C1QTNF3-AMACRE9PGA6 284 aa21.21■□□□□ 0.99
SDCBP-209ENST00000522243 VILLO15195 856 aa21.21■□□□□ 0.99
SDCBP-209ENST00000522243 FLRT2O43155 660 aa21.21■□□□□ 0.99
SDCBP-209ENST00000522243 SMAD6O43541 496 aaKnown RBP21.21■□□□□ 0.99
SDCBP-209ENST00000522243 MAT2AP31153 395 aaKnown RBP21.21■□□□□ 0.99
SDCBP-209ENST00000522243 CCT8P50990 548 aa21.21■□□□□ 0.99
SDCBP-209ENST00000522243 SUZ12Q15022 739 aaKnown RBP21.21■□□□□ 0.99
SDCBP-209ENST00000522243 FAM46CQ5VWP2 391 aa21.21■□□□□ 0.99
SDCBP-209ENST00000522243 ARCQ7LC44 396 aa21.21■□□□□ 0.99
SDCBP-209ENST00000522243 RAB44Q7Z6P3 723 aaPredicted RBP21.21■□□□□ 0.99
SDCBP-209ENST00000522243 SPON2Q9BUD6 331 aa21.21■□□□□ 0.99
SDCBP-209ENST00000522243 C2orf49Q9BVC5 232 aaPredicted RBP21.21■□□□□ 0.99
SDCBP-209ENST00000522243 MSRB2Q9Y3D2 182 aa21.21■□□□□ 0.99
SDCBP-209ENST00000522243 GOLGA8CPA6NN73 597 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 C10orf142B7Z368 130 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 ENDOD1O94919 500 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 UNGP13051 313 aaPredicted RBP21.2■□□□□ 0.98
SDCBP-209ENST00000522243 CD38P28907 300 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 NCAPHQ15003 741 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 CCDC14Q49A88 953 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 C6orf118Q5T5N4 469 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 TRIM72Q6ZMU5 477 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 DRC7Q8IY82 874 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 DCAF4L2Q8NA75 395 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 BAHD1Q8TBE0 780 aaPredicted RBP21.2■□□□□ 0.98
SDCBP-209ENST00000522243 SERAC1Q96JX3 654 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 MAGEB5Q9BZ81 275 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 ZYG11BQ9C0D3 744 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 SEPT11Q9NVA2 429 aaKnown RBP21.2■□□□□ 0.98
SDCBP-209ENST00000522243 TMEM51Q9NW97 253 aa21.2■□□□□ 0.98
SDCBP-209ENST00000522243 APOBEC2Q9Y235 224 aaKnown RBP21.2■□□□□ 0.98
SDCBP-209ENST00000522243 DAAM1Q9Y4D1 1078 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms