RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 PLK5Q496M5 336 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 GXYLT1Q4G148 440 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 CCDC184Q52MB2 194 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 AWAT1Q58HT5 328 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 TTLL5Q6EMB2 1281 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 SLC30A9Q6PML9 568 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 CCDC129Q6ZRS4 1044 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 ENOSF1Q7L5Y1 443 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 ZNF627Q7L945 461 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 RHPN2Q8IUC4 686 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 VPS52Q8N1B4 723 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 C1orf131Q8NDD1 294 aaKnown RBP3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 TNIP2Q8NFZ5 429 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 WIPF2Q8TF74 440 aaPredicted RBP3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 C5orf34Q96MH7 638 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 ASB2Q96Q27 587 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 TIMP4Q99727 224 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 PIP5K1AQ99755 562 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 SDF4Q9BRK5 362 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 NPLQ9BXD5 320 aaPredicted RBP3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 TRIM31Q9BZY9 425 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 TTC12Q9H892 705 aaPredicted RBP3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 ASNSD1Q9NWL6 643 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 SERGEFQ9UGK8 458 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 ADAM18Q9Y3Q7 739 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 TTLL3Q9Y4R7 772 aa3.73□□□□□ -1.81
HMGN1P28-201ENST00000521340 PASKQ96RG2 1323 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 C17orf113A0A1B0GUU1 675 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 PABPN1LA6NDY0 278 aaKnown RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 CBY3A6NI87 242 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 NPIPB8E9PQR5 432 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 TSPAN4O14817 238 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 USP12O75317 370 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 WNT1P04628 370 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 ENO1P06733 434 aaKnown RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 HSP90AA1P07900 732 aaKnown RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 EBLN1P0CF75 366 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 NDUFB7P17568 137 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 RRM1P23921 792 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 ABCD1P33897 745 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 BSGP35613 385 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 GARSP41250 739 aaKnown RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 CLK3P49761 638 aaKnown RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 CLNS1AP54105 237 aaKnown RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 MRPS35P82673 323 aaKnown RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 EFNB1P98172 346 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 HOXA4Q00056 320 aaPredicted RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 NUCB1Q02818 461 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 CREB5Q02930 508 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 TMEM115Q12893 351 aaPredicted RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 MAMLD1Q13495 774 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 CCNG2Q16589 344 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 ERCC6LQ2NKX8 1250 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 RUNDC3AQ59EK9 446 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 ZNF362Q5T0B9 420 aaPredicted RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 TMEM63BQ5T3F8 832 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 DENND2CQ68D51 928 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 AADACL2Q6P093 401 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 NAPRTQ6XQN6 538 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 DCDC5Q6ZRR9 648 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 TRIM74Q86UV6 250 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 TRIM73Q86UV7 250 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 ACTRT2Q8TDY3 377 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 NCSTNQ92542 709 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 IP6K1Q92551 441 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 CNOT9Q92600 299 aaKnown RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 HIC2Q96JB3 615 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 FYTTD1Q96QD9 318 aaKnown RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 TM2D2Q9BX73 214 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 HEMGNQ9BXL5 484 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 CCDC68Q9H2F9 335 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 MMRN2Q9H8L6 949 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 MPP6Q9NZW5 540 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 VPS28Q9UK41 221 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 CCNL1Q9UK58 526 aaPredicted RBP3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 CAPN7Q9Y6W3 813 aa3.72□□□□□ -1.81
HMGN1P28-201ENST00000521340 MST1RQ04912 1400 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 TARSL2A2RTX5 802 aaKnown RBP3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 LIPT2A6NK58 231 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 BTBD19C9JJ37 291 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 GCOM1H8Y6P7 765 aaPredicted RBP3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 QSOX1O00391 747 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 ORC4O43929 436 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 C1QL1O75973 258 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 HEXAP06865 529 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 HSPA1AP0DMV8 641 aaKnown RBP3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 HSPA1BP0DMV9 641 aaKnown RBP3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 AKR1B1P15121 316 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 IL11P20809 199 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 PROZP22891 400 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 ACTN2P35609 894 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 PLA2G5P39877 138 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 RPL7AP62424 266 aaKnown RBP3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 IFI35P80217 286 aaPredicted RBP3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 CYP4A11Q02928 519 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 CUL4AQ13619 759 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 BECN1Q14457 450 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 IRF3Q14653 427 aa3.71□□□□□ -1.82
HMGN1P28-201ENST00000521340 PTPAQ15257 358 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms