RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 SULT1E1P49888 294 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 NXPH1P58417 271 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 RNASE9P60153 205 aaKnown RBP20.17■□□□□ 0.82
PABPC1-215ENST00000520804 KCNMA1Q12791 1236 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 RAPGEF1Q13905 1077 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 ALFQ53S48 1182 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 NAPEPLDQ6IQ20 393 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 Q6ZVU0 165 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 PRPF39Q86UA1 669 aaKnown RBP20.17■□□□□ 0.82
PABPC1-215ENST00000520804 ZNF683Q8IZ20 524 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 PIP4K2CQ8TBX8 421 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 SAP25Q8TEE9 199 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 C18orf8Q96DM3 657 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 MUC3BQ9H195 1237 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 CHMP5Q9NZZ3 219 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 ARHGAP20Q9P2F6 1191 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 HS3ST2Q9Y278 367 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 FHOD1Q9Y613 1164 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 FREM2Q5SZK8 3169 aa20.17■□□□□ 0.82
PABPC1-215ENST00000520804 PKD1L2Q7Z442 2459 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 YKT6O15498 198 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 F9P00740 461 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 ITGAVP06756 1048 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 SCNN1AP37088 669 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 CNTN1Q12860 1018 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 SMAD1Q15797 465 aaKnown RBP20.16■□□□□ 0.82
PABPC1-215ENST00000520804 HSP90AA4PQ58FG1 418 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 KLHDC7AQ5VTJ3 777 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 AGBL4Q5VU57 503 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 MFSD2AQ8NA29 543 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 MDM1Q8TC05 714 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 PSMB7Q99436 277 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 TMEM51Q9NW97 253 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 DACH1Q9UI36 760 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 LHX6Q9UPM6 363 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 SNX10Q9Y5X0 201 aa20.16■□□□□ 0.82
PABPC1-215ENST00000520804 DRGXA6NNA5 263 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 RHOCP08134 193 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 SRCP12931 536 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 ZNF18P17022 549 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 NUDT1P36639 197 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 ARRB1P49407 418 aaPredicted RBP20.15■□□□□ 0.82
PABPC1-215ENST00000520804 KRT83P78385 493 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 DEUP1Q05D60 604 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 SLC25A52Q3SY17 297 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 POM121L1PQ3SYA9 428 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 CCDC157Q569K6 752 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 FAM102AQ5T9C2 384 aaPredicted RBP20.15■□□□□ 0.82
PABPC1-215ENST00000520804 TRIM69Q86WT6 500 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 ERICH1Q86X53 443 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 XYLT1Q86Y38 959 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 MARCH9Q86YJ5 346 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 C1orf74Q96LT6 269 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 TBCBQ99426 244 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 C2orf49Q9BVC5 232 aaPredicted RBP20.15■□□□□ 0.82
PABPC1-215ENST00000520804 NAA15Q9BXJ9 866 aaKnown RBP20.15■□□□□ 0.82
PABPC1-215ENST00000520804 ERVMER34-1Q9H9K5 563 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 DMTF1Q9Y222 760 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 PAXBP1Q9Y5B6 917 aa20.15■□□□□ 0.82
PABPC1-215ENST00000520804 BNIP3LO60238 219 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 SNAP91O60641 907 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 MT-CO1P00395 513 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 EPHA8P29322 1005 aaPredicted RBP20.14■□□□□ 0.81
PABPC1-215ENST00000520804 MAT2AP31153 395 aaKnown RBP20.14■□□□□ 0.81
PABPC1-215ENST00000520804 RXRGP48443 463 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 ACBD5Q5T8D3 534 aaPredicted RBP20.14■□□□□ 0.81
PABPC1-215ENST00000520804 TAF3Q5VWG9 929 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 DHRS13Q6UX07 377 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 LRRC31Q6UY01 552 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 SETD3Q86TU7 594 aaPredicted RBP20.14■□□□□ 0.81
PABPC1-215ENST00000520804 IQCHQ86VS3 1027 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 OXR1Q8N573 874 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 ATP11CQ8NB49 1132 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 DKK4Q9UBT3 224 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 VPS51Q9UID3 782 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 GPSM3Q9Y4H4 160 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 PCDHGA1Q9Y5H4 931 aa20.14■□□□□ 0.81
PABPC1-215ENST00000520804 FAM149AA5PLN7 773 aa20.13■□□□□ 0.81
PABPC1-215ENST00000520804 PES1O00541 588 aaKnown RBP20.13■□□□□ 0.81
PABPC1-215ENST00000520804 ENC1O14682 589 aa20.13■□□□□ 0.81
PABPC1-215ENST00000520804 LDOC1O95751 146 aaPredicted RBP20.13■□□□□ 0.81
PABPC1-215ENST00000520804 LSM8O95777 96 aaKnown RBP20.13■□□□□ 0.81
PABPC1-215ENST00000520804 CTSLP07711 333 aa20.13■□□□□ 0.81
PABPC1-215ENST00000520804 UCHL3P15374 230 aa20.13■□□□□ 0.81
PABPC1-215ENST00000520804 FLT3P36888 993 aa20.13■□□□□ 0.81
PABPC1-215ENST00000520804 TAS2R38P59533 333 aa20.13■□□□□ 0.81
PABPC1-215ENST00000520804 CAMK2BQ13554 666 aa20.13■□□□□ 0.81
PABPC1-215ENST00000520804 NOP9Q86U38 636 aaKnown RBP20.13■□□□□ 0.81
PABPC1-215ENST00000520804 SPATS2Q86XZ4 545 aaKnown RBP20.13■□□□□ 0.81
PABPC1-215ENST00000520804 DCAF4L2Q8NA75 395 aa20.13■□□□□ 0.81
PABPC1-215ENST00000520804 OR2A12Q8NGT7 310 aa20.13■□□□□ 0.81
PABPC1-215ENST00000520804 CNDP2Q96KP4 475 aaKnown RBP20.13■□□□□ 0.81
PABPC1-215ENST00000520804 PREBQ9HCU5 417 aa20.13■□□□□ 0.81
PABPC1-215ENST00000520804 TMPRSS4Q9NRS4 437 aa20.13■□□□□ 0.81
PABPC1-215ENST00000520804 SAMSN1Q9NSI8 373 aaKnown RBP20.13■□□□□ 0.81
PABPC1-215ENST00000520804 FARP1Q9Y4F1 1045 aaPredicted RBP20.13■□□□□ 0.81
PABPC1-215ENST00000520804 IGLV3-10A0A075B6K4 115 aa20.12■□□□□ 0.81
PABPC1-215ENST00000520804 A0A0D9SEW6 157 aa20.12■□□□□ 0.81
PABPC1-215ENST00000520804 FAM170AA1A519 330 aa20.12■□□□□ 0.81
PABPC1-215ENST00000520804 TRABD2BA6NFA1 517 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms