RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CREB3O43889 395 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 UGDHO60701 494 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 FGBP02675 491 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 CSF1P09603 554 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 ARSAP15289 507 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 MVDP53602 400 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 RHAGQ02094 409 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 TLE2Q04725 743 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 UBE3AQ05086 875 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 SRSF1Q07955 248 aaKnown RBP eCLIP3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 SLC12A1Q13621 1099 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 MIDNQ504T8 468 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 MAP3K21Q5TCX8 1036 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 AADACL2Q6P093 401 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 BBS12Q6ZW61 710 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 MRPL10Q7Z7H8 261 aaKnown RBP3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 IGFN1Q86VF2 1251 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 LRRTM4Q86VH4 590 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 LINS1Q8NG48 757 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 WIPF2Q8TF74 440 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 IGFBPL1Q8WX77 278 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 HERVK_113Q902F9 699 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 NCSTNQ92542 709 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 MASTLQ96GX5 879 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 RBM17Q96I25 401 aaKnown RBP3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 ZFYVE19Q96K21 471 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 WDR83Q9BRX9 315 aaKnown RBP3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 TRMOQ9BU70 441 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 HDHD5Q9BXW7 423 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 RMI1Q9H9A7 625 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 TMEM184CQ9NVA4 438 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 TMEM248Q9NWD8 314 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 ARL15Q9NXU5 204 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 PGAP2Q9UHJ9 254 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 CD207Q9UJ71 328 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 LAMP3Q9UQV4 416 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 LRRFIP2Q9Y608 721 aaKnown RBP3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 HFM1A2PYH4 1435 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 RAD54L2Q9Y4B4 1467 aa3.6□□□□□ -1.83
HMGB1P41-201ENST00000520234 LAMC3Q9Y6N6 1575 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 TRBV5-3A0A0A0MS03 114 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 WDR91A4D1P6 747 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 RHODO00212 210 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 NPHP1O15259 732 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 NCAM2O15394 837 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 ANP32CO43423 234 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 WNT1P04628 370 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 HOXD9P28356 352 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 AVPR2P30518 371 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 CIITAP33076 1130 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 MAPK9P45984 424 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 PLCD1P51178 756 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 VAMP2P63027 116 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 CHRNDQ07001 517 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 TBL3Q12788 808 aaKnown RBP3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 C5orf22Q49AR2 442 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 Q4G0T1 1027 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 BRSK2Q8IWQ3 736 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 DDIASQ8IXT1 998 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 VPS52Q8N1B4 723 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 NANOGP1Q8N7R0 232 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 IP6K1Q92551 441 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 TBATAQ96M53 351 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 FRG2BQ96QU4 278 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 REEP2Q9BRK0 252 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 HERC2P3Q9BVR0 1158 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 CADM1Q9BY67 442 aaKnown RBP3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 TRNAU1APQ9NX07 287 aaKnown RBP3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 ZNF70Q9UC06 446 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 GJD2Q9UKL4 321 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 UTS2RQ9UKP6 389 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 GTF2A1LQ9UNN4 478 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 GDAQ9Y2T3 454 aa3.59□□□□□ -1.83
HMGB1P41-201ENST00000520234 FGD6Q6ZV73 1430 aa3.59□□□□□ -1.84
HMGB1P41-201ENST00000520234 UACAQ9BZF9 1416 aa3.59□□□□□ -1.84
HMGB1P41-201ENST00000520234 SNAPC4Q5SXM2 1469 aa3.59□□□□□ -1.84
HMGB1P41-201ENST00000520234 ARHGEF11O15085 1522 aa3.59□□□□□ -1.84
HMGB1P41-201ENST00000520234 CCDC196A0A1B0GTZ2 297 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 VWA3AA6NCI4 1184 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 CXorf65A6NEN9 183 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 FOXO6A8MYZ6 492 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 PPEF2O14830 753 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 STRNO43815 780 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 DHX16O60231 1041 aaKnown RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 NEURL1O76050 574 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 TOP3BO95985 862 aaKnown RBP3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 TMEM191BP0C7N4 346 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 CKMT1AP12532 417 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 LYL1P12980 280 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 CPA1P15085 419 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 TYK2P29597 1187 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 GJC1P36383 396 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 CYP2J2P51589 502 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 ARHGAP8P85298 464 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZBTB16Q05516 673 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 PMPCAQ10713 525 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 MTX1Q13505 466 aa3.58□□□□□ -1.84
HMGB1P41-201ENST00000520234 RBMS2Q15434 407 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms