RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 SPAG4Q9NPE6 437 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 THSD1Q9NS62 852 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 RNF146Q9NTX7 359 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 TRNAU1APQ9NX07 287 aaKnown RBP4.02□□□□□ -1.77
VPS13B-207ENST00000518569 UTS2RQ9UKP6 389 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 FBXO4Q9UKT5 387 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 OSGIN2Q9Y236 505 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 AFG3L2Q9Y4W6 797 aa4.02□□□□□ -1.77
VPS13B-207ENST00000518569 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.02□□□□□ -1.77
VPS13B-207ENST00000518569 PCSK5Q92824 1860 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 A0A0G2JK05 382 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 A0A1B0GVC2 190 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 TCRBV7S3A2A0A539 114 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 CCDC189A1A4V9 331 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 C17orf100A8MU93 164 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 KLK10O43240 276 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 MOSPD3O75425 235 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 TMEM191BP0C7N4 346 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 FCGR2AP12318 317 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 PRKCHP24723 683 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 PSMC2P35998 433 aaKnown RBP4.01□□□□□ -1.77
VPS13B-207ENST00000518569 SLC16A2P36021 539 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 MTNR1AP48039 350 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 CYP2J2P51589 502 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 PMPCAQ10713 525 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 MTX1Q13505 466 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 SMTNL2Q2TAL5 461 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 ALFQ53S48 1182 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 ALG10Q5BKT4 473 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 ALG10BQ5I7T1 473 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 ATG16L1Q676U5 607 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 LRRC8DQ7L1W4 858 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 RNF144BQ7Z419 303 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 KDELC2Q7Z4H8 507 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 C1QL2Q7Z5L3 287 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.01□□□□□ -1.77
VPS13B-207ENST00000518569 FAM185AQ8N0U4 392 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 ARFGAP1Q8N6T3 406 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 TMEM217Q8N7C4 229 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 CENPIQ92674 756 aaPredicted RBP4.01□□□□□ -1.77
VPS13B-207ENST00000518569 TEFMQ96QE5 360 aaKnown RBP4.01□□□□□ -1.77
VPS13B-207ENST00000518569 CTDSP1Q9GZU7 261 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 STN1Q9H668 368 aaKnown RBP4.01□□□□□ -1.77
VPS13B-207ENST00000518569 TASP1Q9H6P5 420 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 WASH6PQ9NQA3 447 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 UPB1Q9UBR1 384 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 FBXO40Q9UH90 709 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 CLDN16Q9Y5I7 305 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 MST1RQ04912 1400 aa4.01□□□□□ -1.77
VPS13B-207ENST00000518569 ARHGEF17Q96PE2 2063 aaPredicted RBP4.01□□□□□ -1.77
VPS13B-207ENST00000518569 TRBV5-7A0A0A0MS05 114 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 FAM90A7PA6NKC0 464 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 SH2D7A6NKC9 451 aaPredicted RBP4□□□□□ -1.77
VPS13B-207ENST00000518569 FAM90A22PA8MWA6 464 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 FAM90A12PA8MX19 464 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 FAM90A23PA8MXZ1 464 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 ZNF814B7Z6K7 855 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 PEX12O00623 359 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 PPEF2O14830 753 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 STRNO43815 780 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 KIF1CO43896 1103 aaKnown RBP4□□□□□ -1.77
VPS13B-207ENST00000518569 HBP1O60381 514 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 GUCY1B2O75343 617 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 TULP3O75386 442 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 PYGLP06737 847 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 POLBP06746 335 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 WEE2P0C1S8 567 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 CNTFP26441 200 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 HNF1BP35680 557 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 GPD2P43304 727 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 KLF9Q13886 244 aaPredicted RBP4□□□□□ -1.77
VPS13B-207ENST00000518569 RBMS2Q15434 407 aaKnown RBP4□□□□□ -1.77
VPS13B-207ENST00000518569 C6orf10Q5SRN2 563 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 TMEM268Q5VZI3 342 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 TTLL5Q6EMB2 1281 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 RETSATQ6NUM9 610 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 SHC4Q6S5L8 630 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 TMTC1Q8IUR5 882 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 NANOGP1Q8N7R0 232 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 SCAIQ8N9R8 606 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 LSM14AQ8ND56 463 aaKnown RBP4□□□□□ -1.77
VPS13B-207ENST00000518569 FAR1Q8WVX9 515 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 MSI2Q96DH6 328 aaKnown RBP4□□□□□ -1.77
VPS13B-207ENST00000518569 CD180Q99467 661 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 IFT27Q9BW83 186 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 HIPK3Q9H422 1215 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 ACAD9Q9H845 621 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 TTC12Q9H892 705 aaPredicted RBP4□□□□□ -1.77
VPS13B-207ENST00000518569 ACTR5Q9H9F9 607 aaPredicted RBP4□□□□□ -1.77
VPS13B-207ENST00000518569 ZNF304Q9HCX3 659 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 SEMA4BQ9NPR2 832 aaPredicted RBP4□□□□□ -1.77
VPS13B-207ENST00000518569 TLR8Q9NR97 1041 aaKnown RBP4□□□□□ -1.77
VPS13B-207ENST00000518569 GGA3Q9NZ52 723 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 C9orf78Q9NZ63 289 aaPredicted RBP4□□□□□ -1.77
VPS13B-207ENST00000518569 MSRB1Q9NZV6 116 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 HEY2Q9UBP5 337 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 PCDHA12Q9UN75 941 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 ICKQ9UPZ9 632 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 DHDHQ9UQ10 334 aa4□□□□□ -1.77
VPS13B-207ENST00000518569 HS3ST3B1Q9Y662 390 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms