RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 BCCIPQ9P287 314 aaKnown RBP eCLIP6.05□□□□□ -1.44
CD47-205ENST00000517766 FZD10Q9ULW2 581 aa6.05□□□□□ -1.44
CD47-205ENST00000517766 PCDHB10Q9UN67 800 aa6.05□□□□□ -1.44
CD47-205ENST00000517766 ACTL7BQ9Y614 415 aa6.05□□□□□ -1.44
CD47-205ENST00000517766 RAD54BQ9Y620 910 aa6.05□□□□□ -1.44
CD47-205ENST00000517766 SCN5AQ14524 2016 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 SF3B1O75533 1304 aaKnown RBP eCLIP6.04□□□□□ -1.443e-6■■■■□ 20.7
CD47-205ENST00000517766 SHROOM3Q8TF72 1996 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 A0A1W2PQH9 124 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 TLDC2A0PJX2 215 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 HHLA1C9JL84 531 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 M0QYT0 321 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 SYN3O14994 580 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 ALOX15BO15296 676 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 CHADO15335 359 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 BEST1O76090 585 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 ZBED1O96006 694 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 LTFP02788 710 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 SHBGP04278 402 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 ZSCAN5DPP0CG00 497 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 ACRP10323 421 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 ETS1P14921 441 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 GLB1P16278 677 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 PECAM1P16284 738 aaPredicted RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 ATP2A2P16615 1042 aaKnown RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 RAB6AP20340 208 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 CYP2C18P33260 490 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 NTF4P34130 210 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 PHBP35232 272 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 RPL22P35268 128 aaKnown RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 MDH1P40925 334 aaKnown RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 BRCC3P46736 316 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 PREPP48147 710 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 CTCFP49711 727 aaPredicted RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 RNASELQ05823 741 aaKnown RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 SCAPQ12770 1279 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 ELAVL2Q12926 359 aaKnown RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 SERINC3Q13530 473 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 NFE2Q16621 373 aaPredicted RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 PLEKHG4Q58EX7 1191 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 PPP6R3Q5H9R7 873 aaPredicted RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 PM20D1Q6GTS8 502 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 C1orf228Q6PIY5 440 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 RTN4RL1Q86UN2 441 aaPredicted RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 ZC3H18Q86VM9 953 aaKnown RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 SPATA2LQ8IUW3 424 aaPredicted RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 UNC45BQ8IWX7 931 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 FAM126BQ8IXS8 530 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 COLGALT2Q8IYK4 626 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 ABI1Q8IZP0 508 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 SH2D3CQ8N5H7 860 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 PQLC3Q8N755 202 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 NAT8LQ8N9F0 302 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 GLIS1Q8NBF1 620 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 C2CD4AQ8NCU7 369 aaPredicted RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 PCDH19Q8TAB3 1148 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 SEPT8Q92599 483 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 PRCCQ92733 491 aaPredicted RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 ISL2Q96A47 359 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 ZBTB9Q96C00 473 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 FUBP3Q96I24 572 aaKnown RBP eCLIP6.04□□□□□ -1.44
CD47-205ENST00000517766 PKMYT1Q99640 499 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 RTP3Q9BQQ7 232 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 PAAF1Q9BRP4 392 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 TMEM175Q9BSA9 504 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 COLEC11Q9BWP8 271 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 MRPL9Q9BYD2 267 aaKnown RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 KLC2Q9H0B6 622 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 AKTIPQ9H8T0 292 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 PIDD1Q9HB75 910 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 SAYSD1Q9NPB0 183 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 GPATCH2LQ9NWQ4 482 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 NINJ2Q9NZG7 142 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 CWC15Q9P013 229 aaKnown RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 GMIPQ9P107 970 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 CACNG4Q9UBN1 327 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 TRIM17Q9Y577 477 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 PCDHB7Q9Y5E2 793 aa6.04□□□□□ -1.44
CD47-205ENST00000517766 TIMM13Q9Y5L4 95 aaPredicted RBP6.04□□□□□ -1.44
CD47-205ENST00000517766 OR6C75A6NL08 312 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 E7ESA3 106 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 E7EVH7 732 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 EEF2KO00418 725 aaKnown RBP6.03□□□□□ -1.44
CD47-205ENST00000517766 ENPP3O14638 875 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 PPP1R12AO14974 1030 aaPredicted RBP6.03□□□□□ -1.44
CD47-205ENST00000517766 NCAM2O15394 837 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 KCNN4O15554 427 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 CDH16O75309 829 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 TADA2AO75478 443 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 GCATO75600 419 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 SPAG6O75602 509 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 DDHD2O94830 711 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 OAZ2O95190 189 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 ACSL3O95573 720 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 ALDH2P05091 517 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 H2AFB1P0C5Y9 115 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 H2AFB2P0C5Z0 115 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 NCAM1P13591 858 aa6.03□□□□□ -1.44
CD47-205ENST00000517766 NME1P15531 152 aaKnown RBP6.03□□□□□ -1.44
CD47-205ENST00000517766 RAG1P15918 1043 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms