RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 RNF34Q969K3 372 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 SRRTQ9BXP5 876 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 OSBPL2Q9H1P3 480 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 COQ4Q9Y3A0 265 aa11.79□□□□□ -0.52
TRAPPC9-203ENST00000517667 FLNCQ14315 2725 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 LY6G6EA0A0G2JKS1 128 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 A0A1W2PQU0 124 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 TCAF2A6NFQ2 919 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 A6NNZ2 444 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 CDRT15L2A8MXV6 281 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 H3BM21 787 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 K7ESM1 405 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 M0QYV0 167 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 PIK3R2O00459 728 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 SLC31A1O15431 190 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 ATP9BO43861 1147 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 PDGFRAP16234 1089 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 PRLRP16471 622 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 TGM2P21980 687 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 TAS2R38P59533 333 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 ZNF177Q13360 481 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 ZCWPW2Q504Y3 356 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 RABGAP1LQ5R372 815 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 RAP1GAP2Q684P5 730 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 BEND5Q7L4P6 421 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 ABI3BPQ7Z7G0 1075 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 CLEC14AQ86T13 490 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 HORMAD1Q86X24 394 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 CCAR2Q8N163 923 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 OR13H1Q8NG92 308 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 WDR48Q8TAF3 677 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 CLEC4CQ8WTT0 213 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 ATXN7L3BQ96GX2 97 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 CCDC114Q96M63 670 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 MYOCQ99972 504 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 DNAJC28Q9NX36 388 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 CFAP45Q9UL16 551 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 U3KQA8 63 aa11.78□□□□□ -0.52
TRAPPC9-203ENST00000517667 CETN3O15182 167 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 GABBR2O75899 941 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 FYNP06241 537 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 SRSF1Q07955 248 aaKnown RBP eCLIP11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 NFATC3Q12968 1075 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 CNGA2Q16280 664 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 ZNF284Q2VY69 593 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 ZSCAN23Q3MJ62 389 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 ARL13BQ3SXY8 428 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 CBWD6Q4V339 395 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 DCAF17Q5H9S7 520 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 CBWD3Q5JTY5 395 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 CBWD5Q5RIA9 395 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 PIP5KL1Q5T9C9 394 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 TCERG1LQ5VWI1 586 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 TMEM270Q6UE05 265 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 Q6ZVU0 165 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 TAC4Q86UU9 113 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 SLC22A18ASQ8N1D0 253 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 UBR7Q8N806 425 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 ATP6V0D2Q8N8Y2 350 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 ZNF548Q8NEK5 533 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 WDR36Q8NI36 951 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 FAM149B1Q96BN6 582 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 CCNL2Q96S94 520 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 MIS12Q9H081 205 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 DYRK4Q9NR20 520 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 SLC12A6Q9UHW9 1150 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 ATXN7L1Q9ULK2 861 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 MAPK8IP1Q9UQF2 711 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 NAALADL1Q9UQQ1 740 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 ENTPD2Q9Y5L3 495 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 CSNK1G3Q9Y6M4 447 aa11.77□□□□□ -0.53
TRAPPC9-203ENST00000517667 COL12A1Q99715 3063 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 TLN1Q9Y490 2541 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 KCNU1A8MYU2 1149 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 TERTO14746 1132 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 NTRK1P04629 796 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 ITGB2P05107 769 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 ITGA2BP08514 1039 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 SLC2A3P11169 496 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 MYF5P13349 255 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 NME1P15531 152 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 PFKFB1P16118 471 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 INHBCP55103 352 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 CLN3Q13286 438 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 MTA1Q13330 715 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 DLG2Q15700 870 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 CDKN3Q16667 212 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 ZC3H12AQ5D1E8 599 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 C6orf132Q5T0Z8 1188 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 CXorf57Q6NSI4 855 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 ATG14Q6ZNE5 492 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 GCNT7Q6ZNI0 430 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 PTAR1Q7Z6K3 402 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 PARGQ86W56 976 aa11.76□□□□□ -0.53
TRAPPC9-203ENST00000517667 SH2D3CQ8N5H7 860 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms