RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 TFDP2Q14188 446 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 DMC1Q14565 340 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 NOMO1Q15155 1222 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 PARP15Q460N3 678 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 LINGO4Q6UY18 593 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 LEKR1Q6ZMV7 388 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 TRIM67Q6ZTA4 783 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 CREG2Q8IUH2 290 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 SUGP1Q8IWZ8 645 aaKnown RBP10.11□□□□□ -0.79
CLN8-202ENST00000517514 CCDC105Q8IYK2 499 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 AHI1Q8N157 1196 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 LZTR1Q8N653 840 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 DCAF4L2Q8NA75 395 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 WFIKKN2Q8TEU8 576 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 HAUS1Q96CS2 278 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 MUC3BQ9H195 1237 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 C10orf88Q9H8K7 445 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 TBC1D17Q9HA65 648 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 PRDM16Q9HAZ2 1276 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 POLR3BQ9NW08 1133 aaPredicted RBP10.11□□□□□ -0.79
CLN8-202ENST00000517514 C2orf42Q9NWW7 574 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 DLGAP2Q9P1A6 1054 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 SLCO3A1Q9UIG8 710 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 FBXL21Q9UKT6 434 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 TTC7AQ9ULT0 858 aaPredicted RBP10.11□□□□□ -0.79
CLN8-202ENST00000517514 NDRG2Q9UN36 371 aaKnown RBP10.11□□□□□ -0.79
CLN8-202ENST00000517514 HEY1Q9Y5J3 304 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 ANKRD36A6QL64 1941 aa10.11□□□□□ -0.79
CLN8-202ENST00000517514 KMT2EQ8IZD2 1858 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 CTAGE9A4FU28 777 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 TBC1D3BA6NDS4 549 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 WASH3PC4AMC7 463 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 APOC4-APOC2K7ER74 178 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 DFFAO00273 331 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 CES2O00748 559 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 MAN2B1O00754 1011 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 PRAMEF11O60813 436 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 ADAM23O75077 832 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 APOC2P02655 101 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 HNRNPLP14866 589 aaKnown RBP eCLIP10.1□□□□□ -0.79
CLN8-202ENST00000517514 VAV1P15498 845 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 DRD1P21728 446 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 TGM2P21980 687 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 PRKCHP24723 683 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 GARSP41250 739 aaKnown RBP10.1□□□□□ -0.79
CLN8-202ENST00000517514 VASPP50552 380 aaPredicted RBP10.1□□□□□ -0.79
CLN8-202ENST00000517514 ECT2LQ008S8 904 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 ZNF234Q14588 700 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 ZNF852Q6ZMS4 543 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 Q6ZS52 159 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 ADAT2Q7Z6V5 191 aaKnown RBP10.1□□□□□ -0.79
CLN8-202ENST00000517514 ZNF557Q8N988 423 aaPredicted RBP10.1□□□□□ -0.79
CLN8-202ENST00000517514 SLC35B2Q8TB61 432 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 ACTL9Q8TC94 416 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 USP33Q8TEY7 942 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 ATG4AQ8WYN0 398 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 MAML1Q92585 1016 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 PBKQ96KB5 322 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 RPL10LQ96L21 214 aaKnown RBP10.1□□□□□ -0.79
CLN8-202ENST00000517514 NSMCE3Q96MG7 304 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 TSGA13Q96PP4 275 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 LGMNQ99538 433 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 SPON2Q9BUD6 331 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 MAK16Q9BXY0 300 aaKnown RBP10.1□□□□□ -0.79
CLN8-202ENST00000517514 TMEM245Q9H330 911 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 MTG2Q9H4K7 406 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 EPHX3Q9H6B9 360 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 CD248Q9HCU0 757 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 ATP13A1Q9HD20 1204 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 THAP10Q9P2Z0 257 aaPredicted RBP10.1□□□□□ -0.79
CLN8-202ENST00000517514 IPO11Q9UI26 975 aaKnown RBP10.1□□□□□ -0.79
CLN8-202ENST00000517514 VPS28Q9UK41 221 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 ERVW-1Q9UQF0 538 aa10.1□□□□□ -0.79
CLN8-202ENST00000517514 EML5Q05BV3 1969 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 TMEM221A6NGB7 291 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 ARHGAP42A6NI28 874 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 FAM170BA6NMN3 283 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 TTC34A8MYJ7 566 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 M0R296 226 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 RNF103O00237 685 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 CBX4O00257 560 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 MUSKO15146 869 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 ZNF500O60304 480 aaPredicted RBP10.09□□□□□ -0.79
CLN8-202ENST00000517514 RNF40O75150 1001 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 TJP3O95049 919 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 FGGP02679 453 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 DLDP09622 509 aaKnown RBP10.09□□□□□ -0.79
CLN8-202ENST00000517514 SRCP12931 536 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 ZFXP17010 805 aaPredicted RBP10.09□□□□□ -0.79
CLN8-202ENST00000517514 POLR2EP19388 210 aaKnown RBP10.09□□□□□ -0.79
CLN8-202ENST00000517514 MSNP26038 577 aaKnown RBP10.09□□□□□ -0.79
CLN8-202ENST00000517514 CASQ1P31415 396 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 SERPINB6P35237 376 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 TIE1P35590 1138 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 IL12RB1P42701 662 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 NRLP54845 237 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 SEC13P55735 322 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 OXCT1P55809 520 aa10.09□□□□□ -0.79
CLN8-202ENST00000517514 OTUD4Q01804 1114 aaKnown RBP10.09□□□□□ -0.79
CLN8-202ENST00000517514 PPIDQ08752 370 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms