RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 BDH2Q9BUT1 245 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TRIM62Q9BVG3 475 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 CEP41Q9BYV8 373 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 EPB41L1Q9H4G0 881 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 POLR1BQ9H9Y6 1135 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 UGT1A7Q9HAW7 530 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 UGT1A10Q9HAW8 530 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 UGT1A8Q9HAW9 530 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 CHST12Q9NRB3 414 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TMEM216Q9P0N5 145 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ADAMTS6Q9UKP5 1117 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 A0A087X1B8 175 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 CAPN14A8MX76 684 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF862O60290 1169 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 DAB1O75553 588 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 CDH3P22223 829 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 MPSTP25325 297 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 GNL1P36915 607 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 CD151P48509 253 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 GEMP55040 296 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 NME5P56597 212 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 CCNIQ14094 377 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 NR1D2Q14995 579 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 HABP4Q5JVS0 413 aaKnown RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 FRMD7Q6ZUT3 714 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 PLD3Q8IV08 490 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 SULF1Q8IWU6 871 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 KBTBD2Q8IY47 623 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF781Q8N8C0 355 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.77□□□□□ -1.333e-6■■■■□ 20.9
CPNE3-203ENST00000517490 MARK4Q96L34 752 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 IL22Q9GZX6 179 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 CYP4F12Q9HCS2 524 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 HMG20AQ9NP66 347 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 COL20A1Q9P218 1284 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 MTF2Q9Y483 593 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 COL18A1P39060 1754 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 TYW5A2RUC4 315 aaKnown RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 MDM4O15151 490 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 CD4P01730 458 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 PIGRP01833 764 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 CCNA2P20248 432 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 MSX2P35548 267 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 GRIA3P42263 894 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 CDK9P50750 372 aaKnown RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 BNIP2Q12982 314 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 NFYCQ13952 458 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 TAF5Q15542 800 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 HERC6Q8IVU3 1022 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 MYO1HQ8N1T3 1032 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 OR52K1Q8NGK4 314 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 CEP19Q96LK0 163 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 VAT1Q99536 393 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 APOL2Q9BQE5 337 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 POMKQ9H5K3 350 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF696Q9H7X3 374 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 NDUFAF1Q9Y375 327 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 LACTBL1A8MY62 500 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 OR6B1O95007 311 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 C2P06681 752 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 ATP5F1P24539 256 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 MAGEA8P43361 318 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 NAA20P61599 178 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 CSHL1Q14406 222 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 LSM12Q3MHD2 195 aaKnown RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 PPM1JQ5JR12 505 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 ZBTB41Q5SVQ8 909 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 OGFRL1Q5TC84 451 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 GPR107Q5VW38 600 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 CDHR3Q6ZTQ4 885 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 METTL23Q86XA0 190 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 NT5DC4Q86YG4 428 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 SIAH1Q8IUQ4 282 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF513Q8N8E2 541 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 DNERQ8NFT8 737 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 TUBGCP3Q96CW5 907 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 NPAS2Q99743 824 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 KCTD14Q9BQ13 255 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 UNC93B1Q9H1C4 597 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 XPNPEP1Q9NQW7 623 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 RIC8BQ9NVN3 520 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 A0A1B0GVG6 124 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 TTLL13PA6NNM8 815 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 H3BSA7 217 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 B4GALT4O60513 344 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 SNNO75324 88 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 KRT8P05787 483 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 LIMK2P53671 638 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 TUBA4AP68366 448 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 CHRNB3Q05901 458 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 ITGADQ13349 1161 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 SEMA5AQ13591 1074 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 TRIM25Q14258 630 aaKnown RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 ABHD15Q6UXT9 468 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 ILDR2Q71H61 639 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 ZBTB8BQ8NAP8 495 aaPredicted RBP6.77□□□□□ -1.33
CPNE3-203ENST00000517490 MCRS1Q96EZ8 462 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 RBBP8Q99708 897 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 APBA2Q99767 749 aa6.77□□□□□ -1.33
CPNE3-203ENST00000517490 TMEM165Q9HC07 324 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms