RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 PKN2Q16513 984 aaKnown RBP12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 MARC1Q5VT66 337 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 FAM71DQ8N9W8 422 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 NLGN2Q8NFZ4 835 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 TAS1R2Q8TE23 839 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 MCCC1Q96RQ3 725 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 WDR12Q9GZL7 423 aaKnown RBP12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 ROGDIQ9GZN7 287 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 NUAK2Q9H093 628 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 ZCWPW1Q9H0M4 648 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 E2F8A0AVK6 867 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 LACTBL1A8MY62 500 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 PMPCBO75439 489 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 GLUD1P00367 558 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 PROCP04070 461 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 SERPINE1P05121 402 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 NDST1P52848 882 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 CCNG2Q16589 344 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 FGD2Q7Z6J4 655 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 PHACTR4Q8IZ21 702 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 POU5F2Q8N7G0 328 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 HES6Q96HZ4 224 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 POLR1BQ9H9Y6 1135 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 CROTQ9UKG9 612 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 DNPEPQ9ULA0 475 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 CBX4O00257 560 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 ATMINO43313 823 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 FAM20BO75063 409 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 USP2O75604 605 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 HPCAP84074 193 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 SLC39A12Q504Y0 691 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 PSRC1Q6PGN9 363 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 SFRP1Q8N474 314 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 RNFT2Q96EX2 444 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 PACSIN1Q9BY11 444 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 HDHD2Q9H0R4 259 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 SYTL2Q9HCH5 934 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 ATP13A1Q9HD20 1204 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 ARHGEF3Q9NR81 526 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 ABCB10Q9NRK6 738 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 DERAQ9Y315 318 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 ACTL7BQ9Y614 415 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 COL14A1Q05707 1796 aaKnown RBP12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 KRT87PA6NCN2 255 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 C1QTNF3-AMACRE9PGA6 284 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 FOXN3O00409 490 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 TIMM44O43615 452 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 AGKQ53H12 422 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 OTUD3Q5T2D3 398 aaPredicted RBP12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 TTI2Q6NXR4 508 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 RNF19BQ6ZMZ0 732 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 TRAPPC12Q8WVT3 735 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 BHMTQ93088 406 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 NSMCE2Q96MF7 247 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 CDRT15Q96T59 188 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 PNPLA3Q9NST1 481 aa12.45□□□□□ -0.42
PCDHGA6-201ENST00000517434 ABCC6O95255 1503 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 MEI4A8MW99 385 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 NDUFS2O75306 463 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 MRPS22P82650 360 aaKnown RBP12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 TOP3AQ13472 1001 aaPredicted RBP12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 FAM98BQ52LJ0 330 aaKnown RBP12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 SAMD4BQ5PRF9 694 aaKnown RBP12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 BROXQ5VW32 411 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 MOB2Q70IA6 237 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 CENPLQ8N0S6 344 aaPredicted RBP12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 HSFY1Q96LI6 401 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 NLNQ9BYT8 704 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 TRNAU1APQ9NX07 287 aaKnown RBP12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 GIN1Q9NXP7 522 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 SHOC2Q9UQ13 582 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 PTCH2Q9Y6C5 1203 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 TBC1D3BA6NDS4 549 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 HOXB8P17481 243 aaPredicted RBP12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 IL12AP29459 219 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 HALP42357 657 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 SCNN1GP51170 649 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 COX10Q12887 443 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 TUBA3CQ13748 450 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 TAF5Q15542 800 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 FUT11Q495W5 492 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 ATAT1Q5SQI0 421 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 THOC7Q6I9Y2 204 aaKnown RBP12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 MZT2BQ6NZ67 158 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 DENND5BQ6ZUT9 1274 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 FAM45AQ8TCE6 357 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 BLOC1S5Q8TDH9 187 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 APOPT1Q96IL0 206 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 VAT1Q99536 393 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 TSPAN16Q9UKR8 245 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 TELO2Q9Y4R8 837 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 HIRAP54198 1017 aaPredicted RBP12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 NAA20P61599 178 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 PSMD5Q16401 504 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 FNDC3BQ53EP0 1204 aaKnown RBP12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 EGFLAMQ63HQ2 1017 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 ZNF57Q68EA5 555 aaPredicted RBP12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 MYO1HQ8N1T3 1032 aa12.44□□□□□ -0.42
PCDHGA6-201ENST00000517434 SERHL2Q9H4I8 314 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms