RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 CNTROBQ8N137 903 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FBXL14Q8N1E6 418 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MYO1HQ8N1T3 1032 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SRBD1Q8N5C6 995 aaKnown RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PNPLA1Q8N8W4 532 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 POC1AQ8NBT0 407 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SETD9Q8NE22 299 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RP9Q8TA86 221 aaKnown RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FAM71BQ8TC56 605 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TMEM255BQ8WV15 326 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 KBTBD7Q8WVZ9 684 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SLC44A1Q8WWI5 657 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RUFY2Q8WXA3 655 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TBC1D5Q92609 795 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 DDX17Q92841 729 aaKnown RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ARRDC3Q96B67 414 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 NMD3Q96D46 503 aaKnown RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RNFT2Q96EX2 444 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PERPQ96FX8 193 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 GRAMD2BQ96HH9 432 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 C3orf30Q96M34 536 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FAM227BQ96M60 508 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 NLRP4Q96MN2 994 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 WDFY2Q96P53 400 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 INPP4AQ96PE3 977 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TWNKQ96RR1 684 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 FIZ1Q96SL8 496 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 LITAFQ99732 161 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CMKLR1Q99788 373 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CCDC3Q9BQI4 270 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ALG8Q9BVK2 526 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PHF7Q9BWX1 381 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 C1QTNF5Q9BXJ0 243 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 C1QTNF1Q9BXJ1 281 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SEZ6LQ9BYH1 1024 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ZNF518BQ9C0D4 1074 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 B3GNT4Q9C0J1 378 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TMEM60Q9H2L4 133 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CHODLQ9H9P2 273 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 PRDM16Q9HAZ2 1276 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SEBOXQ9HB31 216 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TCF7L1Q9HCS4 588 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 KMT5AQ9NQR1 393 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ZDHHC7Q9NXF8 308 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ZKSCAN7Q9P0L1 754 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TMEM181Q9P2C4 612 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 KLHL8Q9P2G9 620 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 KLHL9Q9P2J3 617 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 UPB1Q9UBR1 384 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 DNAJB11Q9UBS4 358 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 NKX1-2Q9UD57 310 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ZNF212Q9UDV6 495 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 AFF4Q9UHB7 1163 aaKnown RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 OGDHLQ9ULD0 1010 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 SLC39A10Q9ULF5 831 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CAPN11Q9UMQ6 739 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CNTN6Q9UQ52 1028 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 GAB2Q9UQC2 676 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 CLCA2Q9UQC9 943 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TNNQ9UQP3 1299 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 B3GALT5Q9Y2C3 310 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 TMA7Q9Y2S6 64 aaKnown RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 WBP11Q9Y2W2 641 aaKnown RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RAP2CQ9Y3L5 183 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 OR2W1Q9Y3N9 320 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 RIPOR2Q9Y4F9 1068 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 DTNAQ9Y4J8 743 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 LSM4Q9Y4Z0 139 aaKnown RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 MRFAP1Q9Y605 127 aa0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 COPG1Q9Y678 874 aaKnown RBP0.35□□□□□ -2.35
RNU6-1049P-201ENST00000516414 ARID2Q68CP9 1835 aa0.34□□□□□ -2.35
RNU6-1049P-201ENST00000516414 A0A1W2PPC4 97 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 C1orf226A1L170 272 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PABPN1LA6NDY0 278 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DUXAA6NLW8 204 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KDM4EB2RXH2 506 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 SLC22A2O15244 555 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 TEX33O43247 280 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 HSPA12AO43301 675 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KCNQ3O43525 872 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DHX16O60231 1041 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 KLK8O60259 260 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZIC3O60481 467 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PLA2G6O60733 806 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ATP2C2O75185 946 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NDUFS7O75251 213 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 DDHD2O94830 711 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 NTSR2O95665 410 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CHEK2O96017 543 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 CGAP01215 116 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PRKCBP05771 671 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 URODP06132 367 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ENO1P06733 434 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 PYGLP06737 847 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 POLBP06746 335 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ANXA2P07355 339 aaKnown RBP0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ZNF883P0CG24 379 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ACP2P11117 423 aa0.34□□□□□ -2.36
RNU6-1049P-201ENST00000516414 ATP1A3P13637 1013 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms