RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 SCML1Q9UN30 329 aa9.23□□□□□ -0.93
CDC42SE2-212ENST00000515533 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.23□□□□□ -0.93
CDC42SE2-212ENST00000515533 COQ4Q9Y3A0 265 aa9.23□□□□□ -0.93
CDC42SE2-212ENST00000515533 SLCO1B1Q9Y6L6 691 aa9.23□□□□□ -0.93
CDC42SE2-212ENST00000515533 DOCK4Q8N1I0 1966 aa9.23□□□□□ -0.93
CDC42SE2-212ENST00000515533 GCN1Q92616 2671 aaKnown RBP9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 SOWAHDA6NJG2 315 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 M0QYV0 167 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 TNFSF14O43557 240 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 DFNA5O60443 496 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 LTFP02788 710 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 ASLP04424 464 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 PAEPP09466 180 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 CD70P32970 193 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 PRCPP42785 496 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 SERPINB4P48594 390 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 RGS7P49802 495 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 SGSHP51688 502 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 C21orf59P57076 290 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 TBX4P57082 545 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 PNOCQ13519 176 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 CDH18Q13634 790 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 STILQ15468 1287 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 COL28A1Q2UY09 1125 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 ZNF658Q5TYW1 1059 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 MSANTD2Q6P1R3 559 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 LCLAT1Q6UWP7 414 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 LAYNQ6UX15 382 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 DNAJC14Q6Y2X3 702 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 USP30Q70CQ3 517 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 PDZD3Q86UT5 571 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 HJURPQ8NCD3 748 aaPredicted RBP9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 WFDC5Q8TCV5 224 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 IRGQQ8WZA9 623 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 SKA1Q96BD8 255 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 NT5C1BQ96P26 610 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 GOLPH3LQ9H4A5 285 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 FBXL12Q9NXK8 326 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 FTSJ1Q9UET6 329 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 BTBD3Q9Y2F9 522 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 RAXQ9Y2V3 346 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 CEP83Q9Y592 693 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 PTPRQQ9UMZ3 2332 aa9.22□□□□□ -0.93
CDC42SE2-212ENST00000515533 GOLGA6L7A0A1B0GV03 622 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 GOLGA6L4A6NEF3 574 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 LRRC72A6NJI9 287 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 H0Y8X5 98 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 KCNK3O14649 394 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 PCDHGA12O60330 932 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 ACSL4O60488 711 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 RNASEH2AO75792 299 aaKnown RBP9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 FBXO21O94952 628 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 MOCS3O95396 460 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 IGLV3-27P01718 113 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 ABCB4P21439 1286 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 SLC6A4P31645 630 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 CTSKP43235 329 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 FMO5P49326 533 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 RACK1P63244 317 aaKnown RBP9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 IL9RQ01113 521 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 LRRC63Q05C16 580 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 CETN1Q12798 172 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 STIM1Q13586 685 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 HNRNPA1L2Q32P51 320 aaKnown RBP9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 FAM133BQ5BKY9 247 aaKnown RBP9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 RNF219Q5W0B1 726 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 KIAA0895LQ68EN5 471 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 PMF1Q6P1K2 205 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 DHX40Q8IX18 779 aaKnown RBP9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 ZC3H3Q8IXZ2 948 aaKnown RBP9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 PPM1KQ8N3J5 372 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 CARNMT1Q8N4J0 409 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 TPCN2Q8NHX9 752 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 SLC35F5Q8WV83 523 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 HNRNPLLQ8WVV9 542 aaKnown RBP9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 SLC35C1Q96A29 364 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 AZIN2Q96A70 460 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 SERPINB11Q96P15 392 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 GSDMAQ96QA5 445 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 OMDQ99983 421 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 MIS12Q9H081 205 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 RSPH9Q9H1X1 276 aaPredicted RBP9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 PABPC3Q9H361 631 aaKnown RBP9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 METTL14Q9HCE5 456 aaKnown RBP9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 DKK4Q9UBT3 224 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 PCDHB4Q9Y5E5 795 aa9.21□□□□□ -0.94
CDC42SE2-212ENST00000515533 A0A1W2PP55 124 aa9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 A0A1W2PPC4 97 aa9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 FAM149AA5PLN7 773 aa9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 TRIM49BA6NDI0 452 aa9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 TRABD2BA6NFA1 517 aa9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 EIF4E1BA6NMX2 242 aaKnown RBP9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 PSMA7O14818 248 aa9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 VILLO15195 856 aa9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 MID1O15344 667 aa9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 SART1O43290 800 aaKnown RBP9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 SMC2O95347 1197 aa9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 MOCS2O96007 188 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 APOEP02649 317 aa9.2□□□□□ -0.94
CDC42SE2-212ENST00000515533 ALBP02768 609 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms