RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	MMS19	Q96T76	1030 aa		6.94	□□□□□ -1.3
HIPK1-210	ENST00000514621	MRPL45	Q9BRJ2	306 aa	Known RBP	6.94	□□□□□ -1.3
HIPK1-210	ENST00000514621	PI4K2A	Q9BTU6	479 aa		6.94	□□□□□ -1.3
HIPK1-210	ENST00000514621	INTS2	Q9H0H0	1204 aa	Known RBP	6.94	□□□□□ -1.3
HIPK1-210	ENST00000514621	APOBEC3G	Q9HC16	384 aa	Known RBP	6.94	□□□□□ -1.3
HIPK1-210	ENST00000514621	MAN1C1	Q9NR34	630 aa		6.94	□□□□□ -1.3
HIPK1-210	ENST00000514621	RAB20	Q9NX57	234 aa		6.94	□□□□□ -1.3
HIPK1-210	ENST00000514621	FBXW11	Q9UKB1	542 aa		6.94	□□□□□ -1.3
HIPK1-210	ENST00000514621	AJAP1	Q9UKB5	411 aa	Predicted RBP	6.94	□□□□□ -1.3
HIPK1-210	ENST00000514621	BARX2	Q9UMQ3	279 aa	Predicted RBP	6.94	□□□□□ -1.3
HIPK1-210	ENST00000514621	COQ6	Q9Y2Z9	468 aa		6.94	□□□□□ -1.3
HIPK1-210	ENST00000514621	COQ4	Q9Y3A0	265 aa		6.94	□□□□□ -1.3
HIPK1-210	ENST00000514621	EYS	Q5T1H1	3165 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	TSC2	P49815	1807 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	WDR27	A2RRH5	827 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	PMM2	O15305	246 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	HCRT	O43612	131 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	TACC1	O75410	805 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	KLHL18	O94889	574 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	VNN2	O95498	520 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	FAM163B	P0C2L3	166 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	OR4Q2	P0C623	313 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	SRGAP2B	P0DMP2	458 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	HOXB8	P17481	243 aa	Predicted RBP	6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	SLC9A1	P19634	815 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	WARS	P23381	471 aa	Known RBP	6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	LMO2	P25791	158 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	CASP14	P31944	242 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	LHX1	P48742	406 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	ADK	P55263	362 aa	Known RBP	6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	CDH8	P55286	799 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	GSDMD	P57764	484 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	TNNC1	P63316	161 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	TBX2	Q13207	712 aa	Predicted RBP	6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	GPR17	Q13304	367 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	TRIM14	Q14142	442 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	CLUL1	Q15846	466 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	EXOC3L4	Q17RC7	722 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	LEXM	Q3ZCV2	418 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	PKN3	Q6P5Z2	889 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	SYCE2	Q6PIF2	218 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	GBP6	Q6ZN66	633 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	LRRTM3	Q86VH5	581 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	ADGRF2	Q8IZF7	708 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	THEM5	Q8N1Q8	247 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	C12orf76	Q8N812	135 aa	Predicted RBP	6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	FBXL13	Q8NEE6	735 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	NUDT10	Q8NFP7	164 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	NEK11	Q8NG66	645 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	SPATA18	Q8TC71	538 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	HDAC7	Q8WUI4	952 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	MBD6	Q96DN6	1003 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	NUDT11	Q96G61	164 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	ERGIC2	Q96RQ1	377 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	ACBD6	Q9BR61	282 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	APOL5	Q9BWW9	433 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	TTYH3	Q9C0H2	523 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	ZCWPW1	Q9H0M4	648 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	SDCBP2	Q9H190	292 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	S1PR5	Q9H228	398 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	PLEKHA4	Q9H4M7	779 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	SMYD3	Q9H7B4	428 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	TRIM39	Q9HCM9	518 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	NLRC4	Q9NPP4	1024 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	DDX43	Q9NXZ2	648 aa	Known RBP	6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	THEG	Q9P2T0	379 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	AFF4	Q9UHB7	1163 aa	Known RBP	6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	CD207	Q9UJ71	328 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	NME7	Q9Y5B8	376 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	6.93	□□□□□ -1.3	1e-6	■■■■□ 21.7
HIPK1-210	ENST00000514621	REV3L	O60673	3130 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	COL6A3	P12111	3177 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	BRWD1	Q9NSI6	2320 aa		6.93	□□□□□ -1.3
HIPK1-210	ENST00000514621	PRAMEF25	A6NGN4	478 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	AKR1B15	C9JRZ8	316 aa	Predicted RBP	6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621		H0Y858	1186 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	KCNK3	O14649	394 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	P4HA2	O15460	535 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	N4BP1	O75113	896 aa	Known RBP	6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	ATP2C2	O75185	946 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	RFPL2	O75678	378 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	SEC24A	O95486	1093 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	TPM1	P09493	284 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	PDGFRB	P09619	1106 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	WEE2	P0C1S8	567 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	PNMA6A	P0CW24	399 aa	Predicted RBP	6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	P4HA1	P13674	534 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	ACAT1	P24752	427 aa	Known RBP	6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	PON1	P27169	355 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	PCSK1	P29120	753 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	GNL1	P36915	607 aa	Predicted RBP	6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	POLR2F	P61218	127 aa	Known RBP	6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	NOP14	P78316	857 aa	Known RBP	6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	MRPS5	P82675	430 aa	Known RBP	6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	TSPY1	Q01534	308 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	ADCY1	Q08828	1119 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	RAPGEF1	Q13905	1077 aa		6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	FNDC3B	Q53EP0	1204 aa	Known RBP	6.92	□□□□□ -1.3
HIPK1-210	ENST00000514621	RARS2	Q5T160	578 aa	Known RBP	6.92	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms