RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 CCNI2Q6ZMN8 369 aaPredicted RBP13.67□□□□□ -0.22
PFDN1-206ENST00000514611 TFAP2DQ7Z6R9 452 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 EPS8L1Q8TE68 723 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 NT5C3BQ969T7 300 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 C18orf8Q96DM3 657 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 PGAP3Q96FM1 320 aaPredicted RBP13.67□□□□□ -0.22
PFDN1-206ENST00000514611 SERAC1Q96JX3 654 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 ELF4Q99607 663 aaPredicted RBP13.67□□□□□ -0.22
PFDN1-206ENST00000514611 CDC6Q99741 560 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 WDCPQ9H6R7 721 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 RRN3Q9NYV6 651 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 IGF2RP11717 2491 aa13.67□□□□□ -0.22
PFDN1-206ENST00000514611 TBC1D3DA0A087WVF3 549 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 TBC1D3IA0A087WXS9 549 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 TBC1D3EA0A087X179 549 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 TBC1D3KA0A087X1G2 549 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 A0A0D9SEW6 157 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 TBC1D3FA6NER0 549 aaPredicted RBP13.66□□□□□ -0.22
PFDN1-206ENST00000514611 TBC1D3LB9A6J9 549 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 K7ERQ8 282 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 CBX4O00257 560 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 LATO43561 262 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 PLRG1O43660 514 aaKnown RBP13.66□□□□□ -0.22
PFDN1-206ENST00000514611 CTSLP07711 333 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 TBC1D3HP0C7X1 549 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 NOMO3P69849 1222 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 CNTN1Q12860 1018 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 SLC25A52Q3SY17 297 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 CCDC157Q569K6 752 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 ARTNQ5T4W7 220 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 NAA35Q5VZE5 725 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 TBC1D3GQ6DHY5 549 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 TBC1D3CQ6IPX1 549 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 DSG4Q86SJ6 1040 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 ERICH1Q86X53 443 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 PROSER1Q86XN7 944 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 TBC1D3Q8IZP1 549 aaPredicted RBP13.66□□□□□ -0.22
PFDN1-206ENST00000514611 PIP4K2CQ8TBX8 421 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 SLC20A1Q8WUM9 679 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 CPA5Q8WXQ8 436 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 CFAP57Q96MR6 1250 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 GANQ9H2C0 597 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 MPP6Q9NZW5 540 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 ARHGAP20Q9P2F6 1191 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 VPS51Q9UID3 782 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 PPM1HQ9ULR3 514 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 HS3ST2Q9Y278 367 aa13.66□□□□□ -0.22
PFDN1-206ENST00000514611 E9PAM4 449 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 C1QTNF3-AMACRE9PGA6 284 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 RNF103O00237 685 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 MCF2LO15068 1137 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 TNFSF14O43557 240 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 LSM8O95777 96 aaKnown RBP13.65□□□□□ -0.22
PFDN1-206ENST00000514611 ZNF18P17022 549 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 GLDCP23378 1020 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 RRM1P23921 792 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 EEF1GP26641 437 aaKnown RBP13.65□□□□□ -0.22
PFDN1-206ENST00000514611 SCNN1AP37088 669 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 NXPH1P58417 271 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 RAB6CQ53S08 254 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 FAM46CQ5VWP2 391 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 NAPEPLDQ6IQ20 393 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 LINGO4Q6UY18 593 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 TMPRSS7Q7RTY8 843 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 BNIPLQ7Z465 357 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 FAM131BQ86XD5 332 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 EMC1Q8N766 993 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 ATP11CQ8NB49 1132 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 OR7D4Q8NG98 312 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 MDM1Q8TC05 714 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 SKA1Q96BD8 255 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 PPP1R9BQ96SB3 815 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 STK33Q9BYT3 514 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 RAB6CQ9H0N0 254 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 GDF3Q9NR23 364 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 METTL5Q9NRN9 209 aaKnown RBP13.65□□□□□ -0.22
PFDN1-206ENST00000514611 FTSJ1Q9UET6 329 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 TMEM59LQ9UK28 342 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 CA5BQ9Y2D0 317 aa13.65□□□□□ -0.22
PFDN1-206ENST00000514611 IGLV3-10A0A075B6K4 115 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 FAM149AA5PLN7 773 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 DRGXA6NNA5 263 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 EPHB6O15197 1021 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 ALOX15BO15296 676 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 SLC7A4O43246 635 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 SMAD6O43541 496 aaKnown RBP13.64□□□□□ -0.23
PFDN1-206ENST00000514611 SRGAP2O75044 1071 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 GFPT2O94808 682 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 ITGAVP06756 1048 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 EPHA8P29322 1005 aaPredicted RBP13.64□□□□□ -0.23
PFDN1-206ENST00000514611 TAS2R38P59533 333 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 KRT83P78385 493 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 INAVAQ3KP66 663 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 PIP5KL1Q5T9C9 394 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 DHRS13Q6UX07 377 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 PHLDB2Q86SQ0 1253 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 SPATS2Q86XZ4 545 aaKnown RBP13.64□□□□□ -0.23
PFDN1-206ENST00000514611 DCAF4L2Q8NA75 395 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 CHST14Q8NCH0 376 aa13.64□□□□□ -0.23
PFDN1-206ENST00000514611 OR2A12Q8NGT7 310 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms