RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 ARMCX2Q7L311 632 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 PDZD8Q8NEN9 1154 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 CXorf38Q8TB03 319 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 LRTOMTQ8WZ04 291 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 FBXL8Q96CD0 374 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 TASP1Q9H6P5 420 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 HESX1Q9UBX0 185 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 C1orf232A0A0U1RR37 186 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 CHADO15335 359 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 PLIN3O60664 434 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 CDH2P19022 906 aaPredicted RBP9.83□□□□□ -0.84
VCAN-210ENST00000513960 NUP107P57740 925 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 STILQ15468 1287 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 FAM187BQ17R55 369 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 OGFOD2Q6N063 350 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 NCCRP1Q6ZVX7 275 aaPredicted RBP9.83□□□□□ -0.84
VCAN-210ENST00000513960 AHI1Q8N157 1196 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 SMYD1Q8NB12 490 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 ZNF778Q96MU6 729 aa9.83□□□□□ -0.84
VCAN-210ENST00000513960 KPNA7A9QM74 516 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 BIRC5O15392 142 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 KDM1AO60341 852 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 FGF3P11487 239 aaPredicted RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 CKMT2P17540 419 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 GRK2P25098 689 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 SDC4P31431 198 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 HSPA13P48723 471 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 PGGT1BP53609 377 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 NME5P56597 212 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 SNX16P57768 344 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 PPIL2Q13356 520 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 GRM2Q14416 872 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 TAZQ16635 292 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ANO4Q32M45 955 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 LDLRAP1Q5SW96 308 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 OGFRL1Q5TC84 451 aaPredicted RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 IL23RQ5VWK5 629 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 MBLAC2Q68D91 279 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ILDR2Q71H61 639 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ZNF669Q96BR6 464 aaPredicted RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 MRPL46Q9H2W6 279 aaKnown RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 VRTNQ9H8Y1 702 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 WARS2Q9UGM6 360 aaKnown RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 TLK1Q9UKI8 766 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 SLC15A5A6NIM6 579 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ZNF839A8K0R7 811 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ZBBXA8MT70 800 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 CD1EP15812 388 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ALOX15P16050 662 aaPredicted RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 TRAF2Q12933 501 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ITGADQ13349 1161 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 NOMO1Q15155 1222 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 DLG2Q15700 870 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 GOLGA7BQ2TAP0 167 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 BOLA3Q53S33 107 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 OLFML1Q6UWY5 402 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 FAM183BPQ6ZVS7 135 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 AFG1LQ8WV93 481 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 EBNA1BP2Q99848 306 aaKnown RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 APOL2Q9BQE5 337 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 EFHD1Q9BUP0 239 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ILKAPQ9H0C8 392 aaPredicted RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 NOL11Q9H8H0 719 aaKnown RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 STK39Q9UEW8 545 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 EBF1Q9UH73 591 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 DCDC2Q9UHG0 476 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 H3BNX3 289 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ZBTB11O95625 1053 aaPredicted RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 CHRNGP07510 517 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 MAP1SQ66K74 1059 aaPredicted RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 SEL1L3Q68CR1 1132 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 LCLAT1Q6UWP7 414 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 KBTBD6Q86V97 674 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 IFNEQ86WN2 208 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 CPNE9Q8IYJ1 553 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 C12orf29Q8N999 325 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 OSBPL6Q9BZF3 934 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 SENP6Q9GZR1 1112 aaPredicted RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 SLC39A10Q9ULF5 831 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 SNX9Q9Y5X1 595 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 C2CD4BA6NLJ0 364 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 PSMD12O00232 456 aaPredicted RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 TIPRLO75663 272 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 PIGNO95427 931 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 METTL18O95568 372 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ZNF286BP0CG31 522 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 EEF1DP29692 281 aaKnown RBP9.82□□□□□ -0.84
VCAN-210ENST00000513960 HMOX2P30519 316 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 CCNA1P78396 465 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ARHGAP1Q07960 439 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 KCNJ11Q14654 390 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 PDK2Q15119 407 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ADRM1Q16186 407 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 CCDC142Q17RM4 750 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 PACS1Q6VY07 963 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 RNF135Q8IUD6 432 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 C7orf31Q8N865 590 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 ADCY4Q8NFM4 1077 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 RNF157Q96PX1 679 aa9.82□□□□□ -0.84
VCAN-210ENST00000513960 PEBP4Q96S96 227 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms