RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 CHD5Q8TDI0 1954 aa10.04□□□□□ -0.8
TOPBP1-209ENST00000513818 ILVBLA1L0T0 632 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 WASH4PA8MWX3 477 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 TTC34A8MYJ7 566 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 K7ERQ8 282 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 CBX4O00257 560 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 NCAM2O15394 837 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 DDX3YO15523 660 aaKnown RBP10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 GPR37L1O60883 481 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 MT-CO1P00395 513 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 HOXB2P14652 356 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 CTNNA2P26232 953 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 AVPR2P30518 371 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 PXNP49023 591 aaPredicted RBP10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 ARF5P84085 180 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 GBE1Q04446 702 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 ADCY2Q08462 1091 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 DMC1Q14565 340 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 POLD3Q15054 466 aaPredicted RBP10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 EIF4HQ15056 248 aaKnown RBP10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 FBXO43Q4G163 708 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 PREPLQ4J6C6 727 aaPredicted RBP10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 ODF2Q5BJF6 829 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 ANKRD20A8PQ5CZ79 823 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 LRRC38Q5VT99 294 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 DCAF12L1Q5VU92 463 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 KIAA1211LQ6NV74 962 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 NPNTQ6UXI9 565 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 SERPINA13PQ6UXR4 307 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 TMEM92Q6UXU6 159 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 SPOCD1Q6ZMY3 1216 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 B4GALNT4Q76KP1 1039 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 RFX6Q8HWS3 928 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 KATNAL2Q8IYT4 538 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 SYCE1Q8N0S2 351 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 ZNF557Q8N988 423 aaPredicted RBP10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 DCAF4L2Q8NA75 395 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 DTWD2Q8NBA8 298 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 HAUS1Q96CS2 278 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 FAF2Q96CS3 445 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 ALS2CR12Q96Q35 445 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 OSBPL6Q9BZF3 934 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 SLC6A17Q9H1V8 727 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 LRRC19Q9H756 370 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 DDX56Q9NY93 547 aaKnown RBP10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 SLCO3A1Q9UIG8 710 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 ERVW-1Q9UQF0 538 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 STON1Q9Y6Q2 735 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 MYO18AQ92614 2054 aaKnown RBP10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 SHROOM3Q8TF72 1996 aa10.03□□□□□ -0.8
TOPBP1-209ENST00000513818 A0A0A0MRY4 1105 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 J3KR12 359 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 ZSCAN12O43309 604 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 SMAD6O43541 496 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 BNIP3LO60238 219 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 ZMPSTE24O75844 475 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 DLDP09622 509 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 PECAM1P16284 738 aaPredicted RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 NTSR1P30989 418 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 HTR7P34969 479 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 CDKN2BP42772 138 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 RPS9P46781 194 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 PAPOLAP51003 745 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 OXCT1P55809 520 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 MRPS21P82921 87 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 ECT2LQ008S8 904 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 DMWDQ09019 674 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 PDK2Q15119 407 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 LCE2DQ5TA82 110 aaPredicted RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 ZNF662Q6ZS27 426 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 NUDT18Q6ZVK8 323 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 Q6ZVU0 165 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 UMODL1-AS1Q8N2C9 162 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 SLC35F6Q8N357 371 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 RNF10Q8N5U6 811 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 UCMAQ8WVF2 138 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 TTC17Q96AE7 1141 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 CALR3Q96L12 384 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 RNF157Q96PX1 679 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 FAM118BQ9BPY3 351 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 C2orf49Q9BVC5 232 aaPredicted RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 C1QTNF1Q9BXJ1 281 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 HEMGNQ9BXL5 484 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 ACE2Q9BYF1 805 aaPredicted RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 TNKS2Q9H2K2 1166 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 RCOR3Q9P2K3 495 aaPredicted RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 THAP10Q9P2Z0 257 aaPredicted RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 SLC25A13Q9UJS0 675 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 MMP17Q9ULZ9 603 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 FCF1Q9Y324 198 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 STARD13Q9Y3M8 1113 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 PCDHA3Q9Y5H8 950 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 CKAP5Q14008 2032 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 NUP205Q92621 2012 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 ZNF318Q5VUA4 2279 aa10.02□□□□□ -0.81
TOPBP1-209ENST00000513818 hCG_1818297A0A087WSY0 165 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 A0A1W2PQF6 199 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 TCRBV21S2A2A0A5A6 115 aa10.01□□□□□ -0.81
TOPBP1-209ENST00000513818 CCDC66A2RUB6 948 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms