RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	INAVA	Q3KP66	663 aa		11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	UNC5A	Q6ZN44	842 aa		11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	RFPL4B	Q6ZWI9	263 aa		11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	MMAA	Q8IVH4	418 aa	Known RBP	11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	CBR4	Q8N4T8	237 aa		11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	TTLL6	Q8N841	843 aa		11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	SOX17	Q9H6I2	414 aa	Predicted RBP	11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	TUFT1	Q9NNX1	390 aa		11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	MRGBP	Q9NV56	204 aa		11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	TXNDC16	Q9P2K2	825 aa		11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	TBC1D14	Q9P2M4	693 aa		11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	AP4E1	Q9UPM8	1137 aa		11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	IFT52	Q9Y366	437 aa		11.34	□□□□□ -0.59
PDCD6-210	ENST00000513582	ZNF839	A8K0R7	811 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	ACOT8	O14734	319 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	PLIN3	O60664	434 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	HLA-DRA	P01903	254 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	EPHX2	P34913	555 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	PLCL1	Q15111	1095 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	NHSL2	Q5HYW2	709 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	FAAH2	Q6GMR7	532 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	TMC5	Q6UXY8	1006 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	CHSY3	Q70JA7	882 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	MPP5	Q8N3R9	675 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	LILRB4	Q8NHJ6	448 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	SH3GL1	Q99961	368 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	MRO	Q9BYG7	248 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	NANOG	Q9H9S0	305 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	SEPT3	Q9UH03	358 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	CNOT11	Q9UKZ1	510 aa	Known RBP	11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	RNF103-CHMP3	A0A140T963	221 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	TNPO2	O14787	897 aa	Known RBP	11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	STAM2	O75886	525 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	ASNS	P08243	561 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	CLC	Q05315	142 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	TKFC	Q3LXA3	575 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	ITIH5	Q86UX2	942 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	SIAH1	Q8IUQ4	282 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	TFAP2C	Q92754	450 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	APBA2	Q99767	749 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	POPDC2	Q9HBU9	364 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	TMEM216	Q9P0N5	145 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	AGO2	Q9UKV8	859 aa	Known RBP	11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	AURKC	Q9UQB9	309 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	SLC30A1	Q9Y6M5	507 aa		11.33	□□□□□ -0.6
PDCD6-210	ENST00000513582	TMEM191C	A6NGB0	347 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	AP3B1	O00203	1094 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	AURKA	O14965	403 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	B4GAT1	O43505	415 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	GABBR2	O75899	941 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	TFE3	P19532	575 aa	Predicted RBP	11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	PSMA2	P25787	234 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	ADORA2A	P29274	412 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	POLR2B	P30876	1174 aa	Known RBP	11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	CCR10	P46092	362 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	CCT8	P50990	548 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	TAF5	Q15542	800 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582		Q3C1V9	767 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	UBE2U	Q5VVX9	321 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	HMBOX1	Q6NT76	420 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	EPGN	Q6UW88	154 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	LAYN	Q6UX15	382 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	FRA10AC1	Q70Z53	315 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	C11orf74	Q86VG3	221 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	PGAM4	Q8N0Y7	254 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	TDRD5	Q8NAT2	981 aa	Known RBP	11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	FEM1C	Q96JP0	617 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	ZBED2	Q9BTP6	218 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	MUC3B	Q9H195	1237 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	DHX33	Q9H6R0	707 aa	Known RBP	11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	PLAC1	Q9HBJ0	212 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	WARS2	Q9UGM6	360 aa	Known RBP	11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	UNCX	A6NJT0	531 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	EGFR	P00533	1210 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	TSHR	P16473	764 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	CLK3	P49761	638 aa	Known RBP	11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	RGS7	P49802	495 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	GALNT2	Q10471	571 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	ABRA	Q8N0Z2	381 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	KCTD6	Q8NC69	237 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	HTRA1	Q92743	480 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	FAM96A	Q9H5X1	160 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	FANCE	Q9HB96	536 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	COL20A1	Q9P218	1284 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	MYH9	P35579	1960 aa	Known RBP	11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	JRK	O75564	520 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	IL1R2	P27930	398 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	ADSL	P30566	484 aa	Predicted RBP	11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	IFITM3	Q01628	133 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	ROR1	Q01973	937 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	OCA2	Q04671	838 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	PRKCQ	Q04759	706 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	NSUN2	Q08J23	767 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	CRY2	Q49AN0	593 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	WDR45B	Q5MNZ6	344 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	MOXD1	Q6UVY6	613 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	TNIP2	Q8NFZ5	429 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	OR7G1	Q8NGA0	311 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms