RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 LZTS3O60299 673 aaPredicted RBP13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 KLHL41O60662 606 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 LRIG2O94898 1065 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 FGFR1P11362 822 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 KCNE1P15382 129 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 TYMPP19971 482 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 L1CAMP32004 1257 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 DCAF12L1Q5VU92 463 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 TPGS1Q6ZTW0 290 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 LCA5Q86VQ0 697 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 PYROXD2Q8N2H3 581 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 FIBCD1Q8N539 461 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 ZNF333Q96JL9 665 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 BTN2A3PQ96KV6 586 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 GRHL1Q9NZI5 618 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 CNTN3Q9P232 1028 aa13.33□□□□□ -0.28
PCDHA4-202ENST00000512229 MARF1Q9Y4F3 1742 aaKnown RBP13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 IGKV6-21A0A0C4DH24 114 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 EEF1B2P24534 225 aaKnown RBP13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 NUDT2P50583 147 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 VARS2Q5ST30 1063 aaKnown RBP13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 ZNF618Q5T7W0 954 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 ARMC12Q5T9G4 340 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 RNASEH2BQ5TBB1 312 aaKnown RBP13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 MFSD5Q6N075 450 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 FUT10Q6P4F1 479 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 ECHDC2Q86YB7 292 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 CLEC4CQ8WTT0 213 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 EFCAB1Q9HAE3 211 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 PDLIM7Q9NR12 457 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 IRAK4Q9NWZ3 460 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 CRYL1Q9Y2S2 319 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 FAM95CA0A1B0GW59 222 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 TPP1O14773 563 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 SYN3O14994 580 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 TCN1P20061 433 aaPredicted RBP13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 PRKAA2P54646 552 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 SDE2Q6IQ49 451 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 POTEHQ6S545 545 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 RASAL3Q86YV0 1011 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 TEX9Q8N6V9 391 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 SNX31Q8N9S9 440 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 TDRD5Q8NAT2 981 aaKnown RBP13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 ACMSDQ8TDX5 336 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 SH3GL2Q99962 352 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 GID8Q9NWU2 228 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 GMIPQ9P107 970 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 AURKCQ9UQB9 309 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 BUD23O43709 281 aaKnown RBP13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 IGSF6O95976 241 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 MLNP12872 115 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 ZNF7P17097 686 aaPredicted RBP13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 SERPINB5P36952 375 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 WNT3AP56704 352 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 ICA1LQ8NDH6 482 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 XYLT2Q9H1B5 865 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 TCF7L2Q9NQB0 619 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 CACNG4Q9UBN1 327 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 SLC13A4Q9UKG4 626 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 DNAJC25-GNG10A0A024R161 153 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 TULP2O00295 520 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 ADH1AP07327 375 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 PDHA1P08559 390 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 TPSB2P20231 275 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 ATXN1P54253 815 aaKnown RBP13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 KCNK10P57789 538 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 TPSAB1Q15661 275 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 PDK4Q16654 411 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 TXNRD3NBQ6F5E7 133 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 GLOD4Q9HC38 313 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 SPG21Q9NZD8 308 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 ZNF212Q9UDV6 495 aa13.32□□□□□ -0.28
PCDHA4-202ENST00000512229 COL22A1Q8NFW1 1626 aaPredicted RBP13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 A0A1W2PPM1 405 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 AGPSO00116 658 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 FCHO1O14526 889 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 IL1R2P27930 398 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 SH3BGRP55822 239 aaPredicted RBP13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 CNGA3Q16281 694 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 TMCO4Q5TGY1 634 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 MIPOL1Q8TD10 442 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 ASPSCR1Q9BZE9 553 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 TMEM161AQ9NX61 479 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 TMEM59LQ9UK28 342 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 ANKRD6Q9Y2G4 727 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 ITGA2BP08514 1039 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 FAM163BP0C2L3 166 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 SERPINB3P29508 390 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 NAGLUP54802 743 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 INCA1Q0VD86 236 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 FASTKD3Q14CZ7 662 aaKnown RBP13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 TAC4Q86UU9 113 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 ST13P4Q8IZP2 240 aaPredicted RBP13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 FUKQ8N0W3 1084 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 PGBD3Q8N328 593 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 TTC30BQ8N4P2 665 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 SLC35B2Q8TB61 432 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 GDAP2Q9NXN4 497 aa13.31□□□□□ -0.28
PCDHA4-202ENST00000512229 FBXO5Q9UKT4 447 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms