RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 KRBA1A5PL33 1030 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM191CA6NGB0 347 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 H3BNC9 293 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 PSMD11O00231 422 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAPK13O15264 365 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 FOXD2O60548 495 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 PFDN1O60925 122 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 CIB2O75838 187 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SNAI1O95863 264 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 USP17L8P0C7I0 530 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 KCNA2P16389 499 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 KCNA5P22460 613 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 AMPD1P23109 780 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 EEF1GP26641 437 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC8A1P32418 973 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 HOXD12P35452 270 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 MDH1P40925 334 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 MLLT3P42568 568 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 GPC3P51654 580 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SQSTM1Q13501 440 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 RCN2Q14257 317 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 RASA3Q14644 834 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADRM1Q16186 407 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TEDDM1Q5T9Z0 273 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TBPL2Q6SJ96 375 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 BICDL1Q6ZP65 573 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 MMS22LQ6ZRQ5 1243 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 KIAA0907Q7Z7F0 614 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 CNTN4Q8IWV2 1026 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 PAQR4Q8N4S7 273 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF248Q8NDW4 579 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 BCAS4Q8TDM0 211 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 APH1BQ8WW43 257 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TCP11Q8WWU5 503 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SMG7Q92540 1137 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 CNDP1Q96KN2 507 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRGUKQ96M69 825 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 FOPNLQ96NB1 174 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TUBGCP5Q96RT8 1024 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SEMA3CQ99985 751 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 PSD2Q9BQI7 771 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 MKNK1Q9BUB5 465 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 YIPF2Q9BWQ6 316 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 STK33Q9BYT3 514 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 ANO3Q9BYT9 981 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 UBA5Q9GZZ9 404 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 IFT122Q9HBG6 1241 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 PAPOLBQ9NRJ5 636 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 MTMR4Q9NYA4 1195 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLCO1C1Q9NYB5 712 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF70Q9UC06 446 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 HCN2Q9UL51 889 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 PACSIN2Q9UNF0 486 aaPredicted RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 LSM2Q9Y333 95 aaKnown RBP1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 TGP01266 2768 aa1.7□□□□□ -2.14
TRAPPC13-211ENST00000512009 A0A1B0GUA9 196 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GOLGA8IPA6NC78 632 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 WDR64B1ANS9 1081 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 C6orf229H3BNL8 230 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARHGEF15O94989 841 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TTC4O95801 387 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 FTLP02792 175 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SRGAP2BP0DMP2 458 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 RBP3P10745 1247 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GLULP15104 373 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 LONP1P36776 959 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CAP2P40123 477 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GARSP41250 739 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 NSFP46459 744 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRAPPC10P48553 1259 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 STX17P56962 302 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PSMC1P62191 440 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SP3Q02447 781 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 UBXN1Q04323 297 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 DSC1Q08554 894 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 IFIT5Q13325 482 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CUL1Q13616 776 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 VGLL4Q14135 290 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 RPS6KA1Q15418 735 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PIGGQ5H8A4 983 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MBLAC2Q68D91 279 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ALG1LQ6GMV1 187 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT80Q6KB66 452 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TIGD7Q6NT04 549 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 XRRA1Q6P2D8 792 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GALNT13Q8IUC8 556 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SYT2Q8N9I0 419 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 C2CD4AQ8NCU7 369 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM161BQ8NDZ6 487 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZFP28Q8NHY6 868 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 DIS3LQ8TF46 1054 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MRGPRFQ96AM1 343 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 HAUS1Q96CS2 278 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SPDL1Q96EA4 605 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MOCOSQ96EN8 888 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TEX37Q96LM6 180 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 WFDC6Q9BQY6 131 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZBED2Q9BTP6 218 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 EFHD1Q9BUP0 239 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms