RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 CNTN5O94779 1100 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 GGCXP38435 758 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 STK19P49842 368 aaPredicted RBP13.85□□□□□ -0.19
CLDND1-224ENST00000511667 RNASE9P60153 205 aaKnown RBP13.85□□□□□ -0.19
CLDND1-224ENST00000511667 DEUP1Q05D60 604 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 KLHL40Q2TBA0 621 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 RAB6CQ53S08 254 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 SYCP2LQ5T4T6 812 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 STRADAQ7RTN6 431 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 C3orf20Q8ND61 904 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 JOSD2Q8TAC2 188 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 SLC30A5Q8TAD4 765 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 MDM1Q8TC05 714 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 CFAP57Q96MR6 1250 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 SPAG5Q96R06 1193 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 NAT10Q9H0A0 1025 aaKnown RBP13.85□□□□□ -0.19
CLDND1-224ENST00000511667 RAB6CQ9H0N0 254 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 C6orf106Q9H6K1 298 aaPredicted RBP13.85□□□□□ -0.19
CLDND1-224ENST00000511667 RETREG1Q9H6L5 497 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 SGK2Q9HBY8 427 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 TMPRSS4Q9NRS4 437 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 COX16Q9P0S2 106 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 PPARGC1AQ9UBK2 798 aaKnown RBP13.85□□□□□ -0.19
CLDND1-224ENST00000511667 SERGEFQ9UGK8 458 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 RAI2Q9Y5P3 530 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 SLCO1B1Q9Y6L6 691 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 SHROOM3Q8TF72 1996 aa13.85□□□□□ -0.19
CLDND1-224ENST00000511667 CFAP46Q8IYW2 2715 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.84□□□□□ -0.19
CLDND1-224ENST00000511667 A0A1B0GTW7 788 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 IGHV4-34P06331 123 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 ACADMP11310 421 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 HDAC4P56524 1084 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 ST8SIA6P61647 398 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 GFPT1Q06210 699 aaPredicted RBP13.84□□□□□ -0.19
CLDND1-224ENST00000511667 C1QBPQ07021 282 aaKnown RBP13.84□□□□□ -0.19
CLDND1-224ENST00000511667 ZNF177Q13360 481 aaPredicted RBP13.84□□□□□ -0.19
CLDND1-224ENST00000511667 ELAVL3Q14576 367 aaKnown RBP13.84□□□□□ -0.19
CLDND1-224ENST00000511667 CST6Q15828 149 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 DCAF12L1Q5VU92 463 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 CCNI2Q6ZMN8 369 aaPredicted RBP13.84□□□□□ -0.19
CLDND1-224ENST00000511667 ZNF783Q6ZMS7 281 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 CCDC117Q8IWD4 279 aaPredicted RBP13.84□□□□□ -0.19
CLDND1-224ENST00000511667 EMC1Q8N766 993 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 RXFP2Q8WXD0 754 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 RNF34Q969K3 372 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 RPL10LQ96L21 214 aaKnown RBP13.84□□□□□ -0.19
CLDND1-224ENST00000511667 PPP1R9BQ96SB3 815 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 AGPAT1Q99943 283 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 ZDHHC5Q9C0B5 715 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 OSBPL2Q9H1P3 480 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 METTL5Q9NRN9 209 aaKnown RBP13.84□□□□□ -0.19
CLDND1-224ENST00000511667 FZD4Q9ULV1 537 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 SNX10Q9Y5X0 201 aa13.84□□□□□ -0.19
CLDND1-224ENST00000511667 SIGLEC16A6NMB1 481 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 E9PAM4 449 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 GOLGA8SH3BPF8 625 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 ALOX15BO15296 676 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 ZMPSTE24O75844 475 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 SEMA4FO95754 770 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 DNTTP04053 509 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 CD59P13987 128 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 VAV1P15498 845 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 CDK11BP21127 795 aaKnown RBP13.83□□□□□ -0.2
CLDND1-224ENST00000511667 MAOBP27338 520 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 RFC1P35251 1148 aaPredicted RBP13.83□□□□□ -0.2
CLDND1-224ENST00000511667 ADRA1BP35368 520 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 DRD3P35462 400 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 PBX1P40424 430 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 ZNF165P49910 485 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 ATXN3P54252 364 aaPredicted RBP13.83□□□□□ -0.2
CLDND1-224ENST00000511667 FAM193AP78312 1265 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 SLC14A1Q13336 389 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 NR1I3Q14994 352 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 CAVIN1Q6NZI2 390 aaKnown RBP13.83□□□□□ -0.2
CLDND1-224ENST00000511667 DBX2Q6ZNG2 339 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 SND1Q7KZF4 910 aaKnown RBP eCLIP13.83□□□□□ -0.2
CLDND1-224ENST00000511667 NLRP14Q86W24 1093 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 SH2D3CQ8N5H7 860 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 AADATQ8N5Z0 425 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 ADAMTS14Q8WXS8 1223 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 NTAN1Q96AB6 310 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 VOPP1Q96AW1 172 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 BIRC7Q96CA5 298 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 NAP1L5Q96NT1 182 aaPredicted RBP13.83□□□□□ -0.2
CLDND1-224ENST00000511667 C11orf70Q9BRQ4 267 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 BTBD1Q9H0C5 482 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 SIK2Q9H0K1 926 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 FSCN3Q9NQT6 498 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 AIPL1Q9NZN9 384 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 PPM1HQ9ULR3 514 aa13.83□□□□□ -0.2
CLDND1-224ENST00000511667 ILVBLA1L0T0 632 aa13.82□□□□□ -0.2
CLDND1-224ENST00000511667 SMTNL1A8MU46 457 aa13.82□□□□□ -0.2
CLDND1-224ENST00000511667 MCF2LO15068 1137 aa13.82□□□□□ -0.2
CLDND1-224ENST00000511667 MID1O15344 667 aa13.82□□□□□ -0.2
CLDND1-224ENST00000511667 ZNF821O75541 412 aaPredicted RBP13.82□□□□□ -0.2
CLDND1-224ENST00000511667 CFIP05156 583 aa13.82□□□□□ -0.2
CLDND1-224ENST00000511667 CALB1P05937 261 aa13.82□□□□□ -0.2
CLDND1-224ENST00000511667 ZNF883P0CG24 379 aa13.82□□□□□ -0.2
CLDND1-224ENST00000511667 SRCP12931 536 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms