RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 ARL4AP40617 200 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 CLCN6P51797 869 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 COPAP53621 1224 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 YBEYP58557 167 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 SLC25A11Q02978 314 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 ZBTB16Q05516 673 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 SLC20A2Q08357 652 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 MESDQ14696 234 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 TCEAL1Q15170 157 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 DLG2Q15700 870 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 ELF2Q15723 593 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 DPYSL2Q16555 572 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 SMTNL2Q2TAL5 461 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 MAP7D1Q3KQU3 841 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 PARP15Q460N3 678 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 PPP6R3Q5H9R7 873 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 KCNT1Q5JUK3 1230 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 C9orf64Q5T6V5 341 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 ZNF776Q68DI1 518 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 LAIR1Q6GTX8 287 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 RETSATQ6NUM9 610 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 SLC36A4Q6YBV0 504 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 RFX8Q6ZV50 586 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 ASCL5Q7RTU5 278 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 METTL3Q86U44 580 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 KBTBD6Q86V97 674 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 UMODL1-AS1Q8N2C9 162 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 SH2D3CQ8N5H7 860 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 ATP11CQ8NB49 1132 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 OR7D4Q8NG98 312 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 FRS2Q8WU20 508 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 RLN3Q8WXF3 142 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 HSPH1Q92598 858 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 ARHGEF2Q92974 986 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 ZC3H10Q96K80 434 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 KCTD15Q96SI1 283 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 ACE2Q9BYF1 805 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 MKRN2Q9H000 416 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 SLC6A17Q9H1V8 727 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 MTG2Q9H4K7 406 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 ITM2CQ9NQX7 267 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 SMG5Q9UPR3 1016 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 HS3ST2Q9Y278 367 aa7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 FARP1Q9Y4F1 1045 aaPredicted RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 MYO18AQ92614 2054 aaKnown RBP7.32□□□□□ -1.24
PDLIM5-215ENST00000511586 A0A0A6YYK5 440 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 IGHV1OR15-9A0A0B4J2B8 117 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 CXorf51AA0A1B0GTR3 108 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 ZSCAN5CA6NGD5 496 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 TMEM110-MUSTN1A8MSY1 372 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 K7ERQ8 282 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 KDELR3O43731 214 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 ZMPSTE24O75844 475 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 MT-CO1P00395 513 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 DNTTP04053 509 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 KRT7P08729 469 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 SRCP12931 536 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 TCF4P15884 667 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 GOT1P17174 413 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 ERCC2P18074 760 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 GLDCP23378 1020 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 OXTRP30559 389 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 ACVRL1P37023 503 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 SLC1A1P43005 524 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 NOP2P46087 812 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 NDST2P52849 883 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 HADHBP55084 474 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 GEMIN4P57678 1058 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 RPS14P62263 151 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 SFSWAPQ12872 951 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 KRT81Q14533 505 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 ELAVL3Q14576 367 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 LPAL2Q16609 132 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 PLK5Q496M5 336 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 TXNRD3NBQ6F5E7 133 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 LINGO4Q6UY18 593 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 RAD9BQ6WBX8 426 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 LPCAT2Q7L5N7 544 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 POLNQ7Z5Q5 900 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 DSG4Q86SJ6 1040 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 ALYREFQ86V81 257 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 ZNF354CQ86Y25 554 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 MAP7D3Q8IWC1 876 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 FAM160A2Q8N612 972 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 RUBCNQ92622 972 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 PTPRN2Q92932 1015 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 LOXL4Q96JB6 756 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 CCDC114Q96M63 670 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 FAM129BQ96TA1 746 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 DUSP15Q9H1R2 295 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 RSPH9Q9H1X1 276 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 NOL6Q9H6R4 1146 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 LRRC19Q9H756 370 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 CWC15Q9P013 229 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 USP36Q9P275 1121 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 NCDNQ9UBB6 729 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 GMEB2Q9UKD1 530 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 SCML1Q9UN30 329 aa7.31□□□□□ -1.24
PDLIM5-215ENST00000511586 ARHGAP42A6NI28 874 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms