RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 RAB6CQ9H0N0 254 aa23.56■■□□□ 1.36
SNF8-209ENST00000510558 SEPT11Q9NVA2 429 aaKnown RBP23.56■■□□□ 1.36
SNF8-209ENST00000510558 VPS51Q9UID3 782 aa23.56■■□□□ 1.36
SNF8-209ENST00000510558 CHD8Q9HCK8 2581 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 A0A0D9SEW6 157 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 SH3BP5O60239 455 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 SRCP12931 536 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 OR1E1P30953 314 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 DRD3P35462 400 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 METAP1P53582 386 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 ADPRHP54922 357 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 SIM1P81133 766 aaPredicted RBP23.55■■□□□ 1.36
SNF8-209ENST00000510558 HLA-BQ31612 363 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 CAVIN1Q6NZI2 390 aaKnown RBP23.55■■□□□ 1.36
SNF8-209ENST00000510558 LAYNQ6UX15 382 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 PHF13Q86YI8 300 aaPredicted RBP23.55■■□□□ 1.36
SNF8-209ENST00000510558 OR14C36Q8NHC7 312 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 CAMK1GQ96NX5 476 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 ZNF212Q9UDV6 495 aa23.55■■□□□ 1.36
SNF8-209ENST00000510558 FNDC3AQ9Y2H6 1198 aaKnown RBP23.55■■□□□ 1.36
SNF8-209ENST00000510558 A0A1W2PPC4 97 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 ALOX15BO15296 676 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 TEX33O43247 280 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 MT-CO1P00395 513 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 CALB1P05937 261 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 ZNF883P0CG24 379 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 KRT3P12035 628 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 PTPN9P43378 593 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 FAM193AP78312 1265 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 HNRNPDQ14103 355 aaKnown RBP23.54■■□□□ 1.36
SNF8-209ENST00000510558 KIF19Q2TAC6 998 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 FAM46CQ5VWP2 391 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 STRADAQ7RTN6 431 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 NAXDQ8IW45 347 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 ATP11CQ8NB49 1132 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 OR7D4Q8NG98 312 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 AGPAT1Q99943 283 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 SELENOOQ9BVL4 669 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 ZYG11BQ9C0D3 744 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 SARDHQ9UL12 918 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 ANKRD6Q9Y2G4 727 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 SNX11Q9Y5W9 270 aa23.54■■□□□ 1.36
SNF8-209ENST00000510558 SMTNL1A8MU46 457 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 C10orf142B7Z368 130 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 PLK4O00444 970 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 MCF2LO15068 1137 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 BNIP3LO60238 219 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 ADRA1BP35368 520 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 CCR5P51681 352 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 ARL13BQ3SXY8 428 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.53■■□□□ 1.36
SNF8-209ENST00000510558 MON1BQ7L1V2 547 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 ADAT2Q7Z6V5 191 aaKnown RBP23.53■■□□□ 1.36
SNF8-209ENST00000510558 C3orf20Q8ND61 904 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 PIP4K2CQ8TBX8 421 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 FAM131CQ96AQ9 280 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 EBF2Q9HAK2 575 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 TM7SF3Q9NS93 570 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 PPARGC1AQ9UBK2 798 aaKnown RBP23.53■■□□□ 1.36
SNF8-209ENST00000510558 PPM1HQ9ULR3 514 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 WASF3Q9UPY6 502 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 CABIN1Q9Y6J0 2220 aa23.53■■□□□ 1.36
SNF8-209ENST00000510558 MAP1BP46821 2468 aaKnown RBP23.53■■□□□ 1.36
SNF8-209ENST00000510558 CHD5Q8TDI0 1954 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 ILVBLA1L0T0 632 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 C1QTNF3-AMACRE9PGA6 284 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 K7ERQ8 282 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 TOP3BO95985 862 aaKnown RBP23.52■■□□□ 1.36
SNF8-209ENST00000510558 CCDC172P0C7W6 258 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 FERP16591 822 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 GLDCP23378 1020 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 RRM1P23921 792 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 RFC1P35251 1148 aaPredicted RBP23.52■■□□□ 1.36
SNF8-209ENST00000510558 RACK1P63244 317 aaKnown RBP23.52■■□□□ 1.36
SNF8-209ENST00000510558 NRG1Q02297 640 aaPredicted RBP23.52■■□□□ 1.36
SNF8-209ENST00000510558 LINGO4Q6UY18 593 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 ZNF783Q6ZMS7 281 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 FAM172AQ8WUF8 416 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 CENPIQ92674 756 aaPredicted RBP23.52■■□□□ 1.36
SNF8-209ENST00000510558 SLC6A18Q96N87 628 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 RTN4Q9NQC3 1192 aaKnown RBP23.52■■□□□ 1.36
SNF8-209ENST00000510558 OR12D3Q9UGF7 316 aa23.52■■□□□ 1.36
SNF8-209ENST00000510558 SLC7A4O43246 635 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 SMAD6O43541 496 aaKnown RBP23.51■■□□□ 1.35
SNF8-209ENST00000510558 SPINK2P20155 84 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 GPD1P21695 349 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 CLCN6P51797 869 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 HDAC4P56524 1084 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 C1QBPQ07021 282 aaKnown RBP23.51■■□□□ 1.35
SNF8-209ENST00000510558 POM121L1PQ3SYA9 428 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 MANEALQ5VSG8 457 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 WDR59Q6PJI9 974 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 DRC7Q8IY82 874 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 CCDC114Q96M63 670 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 SPON2Q9BUD6 331 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 OSBPL2Q9H1P3 480 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 TPX2Q9ULW0 747 aaKnown RBP23.51■■□□□ 1.35
SNF8-209ENST00000510558 FARP1Q9Y4F1 1045 aaPredicted RBP23.51■■□□□ 1.35
SNF8-209ENST00000510558 PCDHB9Q9Y5E1 797 aa23.51■■□□□ 1.35
SNF8-209ENST00000510558 DOCK9Q9BZ29 2069 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms