RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.14□□□□□ -0.63
SNF8-207ENST00000509995 HMGXB4Q9UGU5 601 aa11.14□□□□□ -0.63
SNF8-207ENST00000509995 SLCO3A1Q9UIG8 710 aa11.14□□□□□ -0.63
SNF8-207ENST00000509995 SARDHQ9UL12 918 aa11.14□□□□□ -0.63
SNF8-207ENST00000509995 PADI4Q9UM07 663 aa11.14□□□□□ -0.63
SNF8-207ENST00000509995 USP3Q9Y6I4 520 aa11.14□□□□□ -0.63
SNF8-207ENST00000509995 EPB41L2O43491 1005 aaKnown RBP11.13□□□□□ -0.63
SNF8-207ENST00000509995 SLC26A4O43511 780 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 LDLRP01130 860 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 RPLP0P05388 317 aaKnown RBP11.13□□□□□ -0.63
SNF8-207ENST00000509995 VAV1P15498 845 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 JUNDP17535 347 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 TNNI1P19237 187 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 ATICP31939 592 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 CASP5P51878 434 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 CCL7P80098 99 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 TRPC3Q13507 836 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 SEPT6Q14141 434 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 PITRM1Q5JRX3 1037 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 TMEM164Q5U3C3 297 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 DIEXFQ68CQ4 756 aaKnown RBP11.13□□□□□ -0.63
SNF8-207ENST00000509995 KYAT3Q6YP21 454 aaKnown RBP11.13□□□□□ -0.63
SNF8-207ENST00000509995 HORMAD1Q86X24 394 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 CRYBG2Q8N1P7 616 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 SDR16C5Q8N3Y7 309 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 FBXO18Q8NFZ0 1043 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 FIBINQ8TAL6 211 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 SYAP1Q96A49 352 aaPredicted RBP11.13□□□□□ -0.63
SNF8-207ENST00000509995 MARVELD3Q96A59 401 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 CCDC74AQ96AQ1 378 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 CALML4Q96GE6 196 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 SRRTQ9BXP5 876 aaKnown RBP11.13□□□□□ -0.63
SNF8-207ENST00000509995 CPEB1Q9BZB8 566 aaKnown RBP11.13□□□□□ -0.63
SNF8-207ENST00000509995 VRTNQ9H8Y1 702 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 TBC1D7Q9P0N9 293 aa11.13□□□□□ -0.63
SNF8-207ENST00000509995 ANKHD1Q8IWZ3 2542 aaKnown RBP11.13□□□□□ -0.63
SNF8-207ENST00000509995 NIPBLQ6KC79 2804 aaeCLIP11.12□□□□□ -0.63
SNF8-207ENST00000509995 TTLL8A6PVC2 850 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 K7EM74 188 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 NKX2-8O15522 239 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 HNRNPRO43390 633 aaKnown RBP11.12□□□□□ -0.63
SNF8-207ENST00000509995 DUX1O43812 170 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 GCATO75600 419 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 PRKAR1AP10644 381 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 STK19P49842 368 aaPredicted RBP11.12□□□□□ -0.63
SNF8-207ENST00000509995 ECT2LQ008S8 904 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 ZFP36L1Q07352 338 aaKnown RBP11.12□□□□□ -0.63
SNF8-207ENST00000509995 CDC20Q12834 499 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 PIK3R6Q5UE93 754 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 FAM46CQ5VWP2 391 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 RNF219Q5W0B1 726 aaPredicted RBP11.12□□□□□ -0.63
SNF8-207ENST00000509995 ESRP1Q6NXG1 681 aaKnown RBP11.12□□□□□ -0.63
SNF8-207ENST00000509995 NEK5Q6P3R8 708 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 RFWD3Q6PCD5 774 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 ARHGAP18Q8N392 663 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 PDCD6IPQ8WUM4 868 aaKnown RBP11.12□□□□□ -0.63
SNF8-207ENST00000509995 LARP4BQ92615 738 aaKnown RBP11.12□□□□□ -0.63
SNF8-207ENST00000509995 TCTN2Q96GX1 697 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 SLC45A3Q96JT2 553 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 RPL10LQ96L21 214 aaKnown RBP11.12□□□□□ -0.63
SNF8-207ENST00000509995 BMFQ96LC9 184 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 IRX2Q9BZI1 471 aaPredicted RBP11.12□□□□□ -0.63
SNF8-207ENST00000509995 CDH19Q9H159 772 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 SPASTQ9UBP0 616 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 ERRFI1Q9UJM3 462 aaPredicted RBP11.12□□□□□ -0.63
SNF8-207ENST00000509995 HBS1LQ9Y450 684 aaKnown RBP11.12□□□□□ -0.63
SNF8-207ENST00000509995 CEP83Q9Y592 693 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 PCDHB13Q9Y5F0 798 aa11.12□□□□□ -0.63
SNF8-207ENST00000509995 PCSK5Q92824 1860 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 POM121BA6NF01 834 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 LMO7DNF2Z398 122 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 CAPN5O15484 640 aaPredicted RBP11.11□□□□□ -0.63
SNF8-207ENST00000509995 CLSTN1O94985 981 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 ARSDP51689 593 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 NDST1P52848 882 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 EIF2S3LQ2VIR3 472 aaKnown RBP11.11□□□□□ -0.63
SNF8-207ENST00000509995 ZNF699Q32M78 642 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 ZNF667Q5HYK9 610 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 PIP5KL1Q5T9C9 394 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 TCTN3Q6NUS6 607 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 MMS22LQ6ZRQ5 1243 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 RBFAQ8N0V3 343 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 ARL10Q8N8L6 244 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 KYQ8NBH2 561 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 OR8D1Q8WZ84 308 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 AK8Q96MA6 479 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 LRRN3Q9H3W5 708 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 STIM2Q9P246 746 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 APOBEC3BQ9UH17 382 aaKnown RBP11.11□□□□□ -0.63
SNF8-207ENST00000509995 HS3ST3A1Q9Y663 406 aa11.11□□□□□ -0.63
SNF8-207ENST00000509995 C1QTNF3-AMACRE9PGA6 284 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 IRAK2O43187 625 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 STX6O43752 255 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 ANXA6P08133 673 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 GAP43P17677 238 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 OAS2P29728 719 aaKnown RBP11.1□□□□□ -0.63
SNF8-207ENST00000509995 UGT1A3P35503 534 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 UBA7P41226 1012 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 RABIFP47224 123 aa11.1□□□□□ -0.63
SNF8-207ENST00000509995 ADKP55263 362 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms