RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 TAF2Q6P1X5 1199 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 CLEC14AQ86T13 490 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 LINC00523Q86TU6 105 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 TSNARE1Q96NA8 513 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 GAD1Q99259 594 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 COG4Q9H9E3 785 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 MEIS3P2A8K0S8 358 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 G3V2L1 256 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 LRIG2O94898 1065 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 BAG2O95816 211 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 TPH1P17752 444 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 IRF9Q00978 393 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 TMEM154Q6P9G4 183 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 AAGABQ6PD74 315 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 DCLRE1AQ6PJP8 1040 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 APLFQ8IW19 511 aaPredicted RBP18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 IRGQQ8WZA9 623 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 VPS39Q96JC1 886 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 TTC1Q99614 292 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 PTPN18Q99952 460 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 FAM105AQ9NUU6 356 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 UBP1Q9NZI7 540 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 FLRT1Q9NZU1 646 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 TLK1Q9UKI8 766 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 SNX10Q9Y5X0 201 aa18.28■□□□□ 0.52
CCHCR1-228ENST00000509552 HHLA1C9JL84 531 aa18.27■□□□□ 0.52
CCHCR1-228ENST00000509552 NEBLO76041 1014 aa18.27■□□□□ 0.52
CCHCR1-228ENST00000509552 ABCG1P45844 678 aa18.27■□□□□ 0.52
CCHCR1-228ENST00000509552 DLG2Q15700 870 aa18.27■□□□□ 0.52
CCHCR1-228ENST00000509552 EPGNQ6UW88 154 aa18.27■□□□□ 0.52
CCHCR1-228ENST00000509552 RAPH1Q70E73 1250 aa18.27■□□□□ 0.52
CCHCR1-228ENST00000509552 CTU1Q7Z7A3 348 aaKnown RBP18.27■□□□□ 0.52
CCHCR1-228ENST00000509552 ZNF781Q8N8C0 355 aa18.27■□□□□ 0.52
CCHCR1-228ENST00000509552 GSTCDQ8NEC7 633 aa18.27■□□□□ 0.52
CCHCR1-228ENST00000509552 TMEM30AQ9NV96 361 aa18.27■□□□□ 0.52
CCHCR1-228ENST00000509552 CPA4Q9UI42 421 aa18.27■□□□□ 0.52
CCHCR1-228ENST00000509552 GLTPD2A6NH11 291 aa18.27■□□□□ 0.51
CCHCR1-228ENST00000509552 SRGAP2BP0DMP2 458 aa18.27■□□□□ 0.51
CCHCR1-228ENST00000509552 ERFP50548 548 aa18.27■□□□□ 0.51
CCHCR1-228ENST00000509552 USP4Q13107 963 aa18.27■□□□□ 0.51
CCHCR1-228ENST00000509552 ANO4Q32M45 955 aa18.27■□□□□ 0.51
CCHCR1-228ENST00000509552 SPRYD7Q5W111 196 aa18.27■□□□□ 0.51
CCHCR1-228ENST00000509552 SLC25A41Q8N5S1 370 aa18.27■□□□□ 0.51
CCHCR1-228ENST00000509552 SLC39A10Q9ULF5 831 aa18.27■□□□□ 0.51
CCHCR1-228ENST00000509552 ANKRD6Q9Y2G4 727 aa18.27■□□□□ 0.51
CCHCR1-228ENST00000509552 Q9Y3F1 56 aa18.27■□□□□ 0.51
CCHCR1-228ENST00000509552 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.27■□□□□ 0.51
CCHCR1-228ENST00000509552 DPPA5A6NC42 116 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 CCNT2O60583 730 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 F7P08709 466 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 PRDX6P30041 224 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 MRPS6P82932 125 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 ZNF33AQ06730 810 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 METTL21CQ5VZV1 264 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 PM20D1Q6GTS8 502 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 NAPRTQ6XQN6 538 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 TDRD5Q8NAT2 981 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 RDH11Q8TC12 318 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 ACTRT2Q8TDY3 377 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 CELF6Q96J87 481 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 SCOCQ9UIL1 159 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 ST3GAL5Q9UNP4 418 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 AAR2Q9Y312 384 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 DCXO43602 365 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 NMBRP28336 390 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 FKBP1BP68106 108 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 RALGPS1Q5JS13 557 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 RWDD4Q6NW29 188 aaKnown RBP18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 BHLHA9Q7RTU4 235 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 MYLPFQ96A32 169 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 OXCT2Q9BYC2 517 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 ILKAPQ9H0C8 392 aaPredicted RBP18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 TASP1Q9H6P5 420 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 CSNK1G1Q9HCP0 422 aa18.26■□□□□ 0.51
CCHCR1-228ENST00000509552 LOC100653049A0A140TA62 436 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 KRT34O76011 436 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 LINGO3P0C6S8 592 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 HOXC8P31273 242 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 RPL9P32969 192 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 EPHB1P54762 984 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 DSG1Q02413 1049 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 FSCN1Q16658 493 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 TAC4Q86UU9 113 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 C3orf58Q8NDZ4 430 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 GPR22Q99680 433 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 APBA2Q99767 749 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 MCMBPQ9BTE3 642 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 KIFC1Q9BW19 673 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 SHCBP1LQ9BZQ2 653 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 OXSMQ9NWU1 459 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 CPSF2Q9P2I0 782 aaKnown RBP18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 ARHGAP26Q9UNA1 814 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 TRPV2Q9Y5S1 764 aa18.25■□□□□ 0.51
CCHCR1-228ENST00000509552 E9PBE3 544 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 GOLGA8TH3BQL2 631 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 KLHL41O60662 606 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 ODC1P11926 461 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 CYP2C18P33260 490 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 PRKAA2P54646 552 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 PURAQ00577 322 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms