RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 CLCN6P51797 869 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 GEMIN4P57678 1058 aaKnown RBP20.13■□□□□ 0.81
FGFR4-211ENST00000509511 ELAVL3Q14576 367 aaKnown RBP20.13■□□□□ 0.81
FGFR4-211ENST00000509511 POLD3Q15054 466 aaPredicted RBP20.13■□□□□ 0.81
FGFR4-211ENST00000509511 MAP7D1Q3KQU3 841 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 PARP15Q460N3 678 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 TTC31Q49AM3 519 aaPredicted RBP20.13■□□□□ 0.81
FGFR4-211ENST00000509511 ACCSLQ4AC99 568 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 ZNF776Q68DI1 518 aaPredicted RBP20.13■□□□□ 0.81
FGFR4-211ENST00000509511 ZNF354CQ86Y25 554 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 SH2D3CQ8N5H7 860 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 ATP11CQ8NB49 1132 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 RLN3Q8WXF3 142 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 BAG1Q99933 345 aaPredicted RBP20.13■□□□□ 0.81
FGFR4-211ENST00000509511 HINFPQ9BQA5 517 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 NDFIP2Q9NV92 336 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 HPCAL4Q9UM19 191 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 CYP8B1Q9UNU6 501 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 INVSQ9Y283 1065 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 FRYLO94915 3013 aa20.13■□□□□ 0.81
FGFR4-211ENST00000509511 TMEM110-MUSTN1A8MSY1 372 aa20.12■□□□□ 0.81
FGFR4-211ENST00000509511 DCLK1O15075 740 aa20.12■□□□□ 0.81
FGFR4-211ENST00000509511 RNASEH1O60930 286 aaKnown RBP20.12■□□□□ 0.81
FGFR4-211ENST00000509511 NDUFA10O95299 355 aa20.12■□□□□ 0.81
FGFR4-211ENST00000509511 RARAP10276 462 aa20.12■□□□□ 0.81
FGFR4-211ENST00000509511 GOT1P17174 413 aa20.12■□□□□ 0.81
FGFR4-211ENST00000509511 GJC1P36383 396 aa20.12■□□□□ 0.81
FGFR4-211ENST00000509511 ZBTB16Q05516 673 aa20.12■□□□□ 0.81
FGFR4-211ENST00000509511 METTL3Q86U44 580 aaKnown RBP20.12■□□□□ 0.81
FGFR4-211ENST00000509511 KBTBD6Q86V97 674 aa20.12■□□□□ 0.81
FGFR4-211ENST00000509511 FAM160A2Q8N612 972 aaPredicted RBP20.12■□□□□ 0.81
FGFR4-211ENST00000509511 ARHGEF2Q92974 986 aaKnown RBP20.12■□□□□ 0.81
FGFR4-211ENST00000509511 CCDC114Q96M63 670 aa20.12■□□□□ 0.81
FGFR4-211ENST00000509511 ACE2Q9BYF1 805 aaPredicted RBP20.12■□□□□ 0.81
FGFR4-211ENST00000509511 RSPH9Q9H1X1 276 aaPredicted RBP20.12■□□□□ 0.81
FGFR4-211ENST00000509511 MTG2Q9H4K7 406 aa20.12■□□□□ 0.81
FGFR4-211ENST00000509511 USP36Q9P275 1121 aaKnown RBP20.12■□□□□ 0.81
FGFR4-211ENST00000509511 CXorf51AA0A1B0GTR3 108 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 MAP3K13O43283 966 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 RHOBTB1O94844 696 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 DNTTP04053 509 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 SRCP12931 536 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 BCKDHBP21953 392 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 GLDCP23378 1020 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 ACVRL1P37023 503 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 ARHGAP25P42331 645 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 SERPINH1P50454 418 aaKnown RBP20.11■□□□□ 0.81
FGFR4-211ENST00000509511 GSDMDP57764 484 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 YBEYP58557 167 aaPredicted RBP20.11■□□□□ 0.81
FGFR4-211ENST00000509511 KRT81Q14533 505 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 PLK5Q496M5 336 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 C9orf64Q5T6V5 341 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 LINGO4Q6UY18 593 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 SLC36A4Q6YBV0 504 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 Q6ZVU0 165 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 DSG4Q86SJ6 1040 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 UMODL1-AS1Q8N2C9 162 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 RUBCNQ92622 972 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 ZC3H10Q96K80 434 aaKnown RBP20.11■□□□□ 0.81
FGFR4-211ENST00000509511 PCDHA13Q9Y5I0 950 aa20.11■□□□□ 0.81
FGFR4-211ENST00000509511 EPN1Q9Y6I3 576 aaPredicted RBP20.11■□□□□ 0.81
FGFR4-211ENST00000509511 ZSCAN5CA6NGD5 496 aaPredicted RBP20.1■□□□□ 0.81
FGFR4-211ENST00000509511 KRT7P08729 469 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 HCAR3P49019 387 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 TPMTP51580 245 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 RPS14P62263 151 aaKnown RBP20.1■□□□□ 0.81
FGFR4-211ENST00000509511 ARF5P84085 180 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 DPYSQ14117 519 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 MESDQ14696 234 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 TCEAL1Q15170 157 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 DLG2Q15700 870 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 PMS2CLQ68D20 193 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 TXNRD3NBQ6F5E7 133 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 C22orf39Q6P5X5 142 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 FRS2Q8WU20 508 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 OR8D1Q8WZ84 308 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 CWC15Q9P013 229 aaKnown RBP20.1■□□□□ 0.81
FGFR4-211ENST00000509511 SCML1Q9UN30 329 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 PIEZO1Q92508 2521 aa20.1■□□□□ 0.81
FGFR4-211ENST00000509511 ZFHX2Q9C0A1 2572 aaPredicted RBP20.09■□□□□ 0.81
FGFR4-211ENST00000509511 IGHV1OR15-9A0A0B4J2B8 117 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 RASA4BC9J798 803 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 RASA4O43374 803 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 ZMPSTE24O75844 475 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 MT-CO1P00395 513 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 C7P10643 843 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 VAV1P15498 845 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 NDST2P52849 883 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 RPL6Q02878 288 aaKnown RBP20.09■□□□□ 0.81
FGFR4-211ENST00000509511 SLC20A2Q08357 652 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 LPCAT2Q7L5N7 544 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 POLNQ7Z5Q5 900 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 PTPRN2Q92932 1015 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 HMCESQ96FZ2 354 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 LOXL4Q96JB6 756 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 CEP44Q9C0F1 390 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 DUSP15Q9H1R2 295 aaPredicted RBP20.09■□□□□ 0.81
FGFR4-211ENST00000509511 NOL6Q9H6R4 1146 aaKnown RBP20.09■□□□□ 0.81
FGFR4-211ENST00000509511 PCDH18Q9HCL0 1135 aa20.09■□□□□ 0.81
FGFR4-211ENST00000509511 RCOR3Q9P2K3 495 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms