RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 OGDHLQ9ULD0 1010 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 SLC38A8A6NNN8 435 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 OAS1P00973 400 aaKnown RBP15.18■□□□□ 0.02
PHF3-209ENST00000509330 COL6A1P12109 1028 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 NEK3P51956 506 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 SEPT6Q14141 434 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 KCTD11Q693B1 232 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 ANKS3Q6ZW76 656 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 CRIPAKQ8N1N5 446 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 SPPL2BQ8TCT7 592 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 MANSC1Q9H8J5 431 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 PRDM16Q9HAZ2 1276 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 ZNF358Q9NW07 568 aa15.18■□□□□ 0.02
PHF3-209ENST00000509330 FGF10O15520 208 aaPredicted RBP15.17■□□□□ 0.02
PHF3-209ENST00000509330 SEC24AO95486 1093 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 ITGB8P26012 769 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 PRMT2P55345 433 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 PRPSAP1Q14558 356 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 DLG2Q15700 870 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 APBB2Q92870 758 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 FSD1LQ9BXM9 530 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 CYP4F11Q9HBI6 524 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 IARS2Q9NSE4 1012 aaKnown RBP15.17■□□□□ 0.02
PHF3-209ENST00000509330 KLHL14Q9P2G3 628 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 MARCOQ9UEW3 520 aaPredicted RBP15.17■□□□□ 0.02
PHF3-209ENST00000509330 TRHDEQ9UKU6 1024 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 EDF1O60869 148 aaKnown RBP15.17■□□□□ 0.02
PHF3-209ENST00000509330 ALDOAP04075 364 aaKnown RBP15.17■□□□□ 0.02
PHF3-209ENST00000509330 MAGEA11P43364 429 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 SCTRP47872 440 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 SERPINB4P48594 390 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 COG7P83436 770 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 NIPAL4Q0D2K0 466 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 SLC10A7Q0GE19 358 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 ITIH4Q14624 930 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 STRA8Q7Z7C7 330 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 FITM2Q8N6M3 262 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.17■□□□□ 0.02
PHF3-209ENST00000509330 ACVR1CQ8NER5 493 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 BHMTQ93088 406 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 ZYG11BQ9C0D3 744 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 VPS11Q9H270 941 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 LRRC40Q9H9A6 602 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 GKN1Q9NS71 199 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 SMPD4Q9NXE4 827 aa15.17■□□□□ 0.02
PHF3-209ENST00000509330 A0A0G2JND7 137 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 TM9SF1O15321 606 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 MTSS1O43312 755 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 KITP10721 976 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 CCNCP24863 283 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 ACVRL1P37023 503 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 MNX1P50219 401 aaPredicted RBP15.16■□□□□ 0.02
PHF3-209ENST00000509330 SLC18A2Q05940 514 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 ANKRD20A4Q4UJ75 823 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 STEAP4Q687X5 459 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 BEND5Q7L4P6 421 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 DPF3Q92784 378 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 ALKBH8Q96BT7 664 aaKnown RBP15.16■□□□□ 0.02
PHF3-209ENST00000509330 UNKQ9C0B0 810 aaKnown RBP15.16■□□□□ 0.02
PHF3-209ENST00000509330 SP110Q9HB58 689 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 GLOD4Q9HC38 313 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 CASS4Q9NQ75 786 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 ARL2BPQ9Y2Y0 163 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 RAD54BQ9Y620 910 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 MATN3O15232 486 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 HOXA2O43364 376 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 ITGA2BP08514 1039 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 ETV4P43268 484 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 PLD1Q13393 1074 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 IKBKEQ14164 716 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 USP41Q3LFD5 358 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 ZNF276Q8N554 614 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 RFWD2Q8NHY2 731 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 SLC2A6Q9UGQ3 507 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 ZNF180Q9UJW8 692 aa15.16■□□□□ 0.02
PHF3-209ENST00000509330 H7C4K7 107 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 RTN3O95197 1032 aaPredicted RBP15.15■□□□□ 0.02
PHF3-209ENST00000509330 CSF2RAP15509 400 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 OR1E1P30953 314 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 MAGEA9P43362 315 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 TAF12Q16514 161 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 NADSYN1Q6IA69 706 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 ARHGAP18Q8N392 663 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 ATP6V0D2Q8N8Y2 350 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 IGSF21Q96ID5 467 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 TBL1YQ9BQ87 522 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 RASSF4Q9H2L5 321 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 HAUS2Q9NVX0 235 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 TRIM33Q9UPN9 1127 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 ZCWPW2A0A1B0GU75 182 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 CCL22O00626 93 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 TBC1D4O60343 1298 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 HOXC13P31276 330 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 DSC2Q02487 901 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 CDH17Q12864 832 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 ELAVL2Q12926 359 aaKnown RBP15.15■□□□□ 0.02
PHF3-209ENST00000509330 KCNMB4Q86W47 210 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 RNF135Q8IUD6 432 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 LGI2Q8N0V4 545 aa15.15■□□□□ 0.02
PHF3-209ENST00000509330 CLSTN3Q9BQT9 956 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms