RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SELENOOQ9BVL4 669 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 KLC2Q9H0B6 622 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 ZSCAN32Q9NX65 697 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 ELOVL2Q9NXB9 296 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 CNOT8Q9UFF9 292 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 SERGEFQ9UGK8 458 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 STAP1Q9ULZ2 295 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 SMG5Q9UPR3 1016 aaKnown RBP7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 INVSQ9Y283 1065 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 SLCO1B1Q9Y6L6 691 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 CEP250Q9BV73 2442 aa7.42□□□□□ -1.22
TOPBP1-207ENST00000509162 A0A1B0GVM2 712 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 TBC1D3BA6NDS4 549 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 TCAF2A6NFQ2 919 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 F5H5T6 163 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 K7ERQ8 282 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 NCAM2O15394 837 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 RTN2O75298 545 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 ZNF821O75541 412 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 LRIG2O94898 1065 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 ZIC2O95409 532 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 APBB3O95704 486 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 GZMAP12544 262 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 TNFAIP3P21580 790 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 SDC4P31431 198 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 ADRA1BP35368 520 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 ACVRL1P37023 503 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 MRE11P49959 708 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 GALCP54803 685 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 TAS2R40P59535 323 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 TPM4P67936 248 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 ARF5P84085 180 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 INSM1Q01101 510 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 NRG1Q02297 640 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 VASH1Q7L8A9 365 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 KBTBD6Q86V97 674 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 LONP2Q86WA8 852 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 AHI1Q8N157 1196 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 NPWQ8N729 165 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 ATP6V0D2Q8N8Y2 350 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 TSTD1Q8NFU3 115 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 FRS2Q8WU20 508 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 RLN3Q8WXF3 142 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 ACDQ96AP0 544 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 RPRD1AQ96P16 312 aaPredicted RBP7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 XPO6Q96QU8 1125 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 NUP58Q9BVL2 599 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 SLC2A11Q9BYW1 496 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 CIPCQ9C0C6 399 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 SIK2Q9H0K1 926 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 SMOC1Q9H4F8 434 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 OSGEPQ9NPF4 335 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 VPS51Q9UID3 782 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 SALL4Q9UJQ4 1053 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 FZD10Q9ULW2 581 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 TBC1D30Q9Y2I9 924 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 LUC7L2Q9Y383 392 aaKnown RBP7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 PCDHGA2Q9Y5H1 932 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 SPAG17Q6Q759 2223 aa7.41□□□□□ -1.22
TOPBP1-207ENST00000509162 IGHV1OR15-9A0A0B4J2B8 117 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 TTC34A8MYJ7 566 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 CBFA2T2O43439 604 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 MT-CO1P00395 513 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 CYBBP04839 570 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 CD48P09326 243 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 MIPP30301 263 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 NTSR1P30989 418 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 P2RY2P41231 377 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 ARSEP51690 589 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 PLK1P53350 603 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 FOXK2Q01167 660 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 CAMK2GQ13555 558 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 CDH18Q13634 790 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 TRIM14Q14142 442 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 EIF4HQ15056 248 aaKnown RBP7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 SLC18A3Q16572 532 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 FAM182AQ5T1J6 154 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 ALKBH5Q6P6C2 394 aaKnown RBP7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 RAD9BQ6WBX8 426 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 ALYREFQ86V81 257 aaKnown RBP7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 ARHGAP12Q8IWW6 846 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 CHPFQ8IZ52 775 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 MSANTD4Q8NCY6 345 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 WFIKKN2Q8TEU8 576 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 FNIP1Q8TF40 1166 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 HMGB4Q8WW32 186 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 ITPKCQ96DU7 683 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 MRFAP1L1Q96HT8 127 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 VCPIP1Q96JH7 1222 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 MRGPRX1Q96LB2 322 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 NSMCE3Q96MG7 304 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 PRRX2Q99811 253 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 CNPY3Q9BT09 278 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 DUSP15Q9H1R2 295 aaPredicted RBP7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 GOLPH3Q9H4A6 298 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 PRSS16Q9NQE7 514 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 ETNK2Q9NVF9 386 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 KLHL11Q9NVR0 708 aa7.4□□□□□ -1.22
TOPBP1-207ENST00000509162 RRN3Q9NYV6 651 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms